Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_023503.1 Length=48800 Score E Sequences producing significant alignments: (Bits) Value seq52446 102 3e-17 seq53106 91.5 5e-14 >seq52446 Length=235 Score = 102 bits (112), Expect = 3e-17 Identities = 128/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 2716 TTGACTGAAACTTTTGACGCTATCGAAATGGCGAAAGAAGCTGGATACACAGCAGTAGTA 2775 || || |||||||||| || || |||||||| ||| | ||| |||| ||| || | Sbjct 234 TTAACGGAAACTTTTGCTGCCATTGAAATGGCAAAATCAAATGGCTACAAAGCCGTCATT 175 Query 2776 TCACACCGTTCAGGTGAAACTGAAGATTCAACAATCGCTGATATTGCAGTTGCAACTAAC 2835 || ||||| ||||||||||| ||||| |||| || || |||| ||||||||| | || Sbjct 174 TCTCACCGATCAGGTGAAACAGAAGACACAACGATATCTCATATAGCAGTTGCATCGAAT 115 Query 2836 GCTGGTCAAATTAAGACAGGTTCATTGTCACGTACTGACCGTATTGCTAAATACAA 2891 ||| ||||| || || || || | |||||| |||| | |||| || || || Sbjct 114 TGTGGGCAAATAAAAACTGGCTCGCTATCACGTTCTGATAGGCTTGCAAAGTATAA 59 >seq53106 Length=236 Score = 91.5 bits (100), Expect = 5e-14 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 2716 TTGACTGAAACTTTTGACGCTATCGAAATGGCGAAAGAAGCTGGATACACAGCAGTAGTA 2775 || || |||||||| | |||||| |||||||| ||| | ||| || | ||| || | Sbjct 235 TTAACGGAAACTTTGGCCGCTATTGAAATGGCAAAATCAAATGGTTATAAAGCTGTCATT 176 Query 2776 TCACACCGTTCAGGTGAAACTGAAGATTCAACAATCGCTGATATTGCAGTTGCAACTAAC 2835 || ||||| ||||||||||| ||||| ||||||| | | || ||||||||| | || Sbjct 175 TCTCACCGATCAGGTGAAACAGAAGACACAACAATATCCCACATAGCAGTTGCATCAAAT 116 Query 2836 GCTGGTCAAATTAAGACAGGTTCATTGTCACGTACTGA 2873 ||| ||||| || || || || || || || |||| Sbjct 115 TGTGGACAAATAAAAACTGGCTCGTTATCGCGCTCTGA 78 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 155862456268932