Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_033006.1 Length=11332 Score E Sequences producing significant alignments: (Bits) Value seq5447 145 6e-31 >seq5447 Length=4366 Score = 145 bits (160), Expect = 6e-31 Identities = 403/607 (66%), Gaps = 17/607 (3%) Strand=Plus/Minus Query 6379 ATTATAGGATTAAAAGAGAAGGAAAGAGAACTAAAGGAGGATGGTAGATTCTACTGCCTA 6438 || || ||| | |||| || ||||||||| |||| || || ||||||| | | |||| Sbjct 2777 ATAATTGGACTCAAAGCTAAAGAAAGAGAAGTAAAAGAAGAGGGTAGATATTTTTCCCTA 2718 Query 6439 ATGTCCTGGGCCTTGAGGGAATATTTTGTCGTCACTGAGTATTTGATTAAATTACATTTT 6498 ||||| |||| |||| |||||||| || || || || || | |||||| | ||| Sbjct 2717 ATGTCTTGGGAGATGAGAGAATATTTCGTGGTTACCGAATACCTCATTAAAAAATATTAC 2658 Query 6499 ATTCCTCTTTTTAAGGGTCTGACTGTCGCTGATGACATGACAACACTAATCAAGAAGATG 6558 | ||||||||||| || |||| || || ||||| |||||||| | || ||||||||| Sbjct 2657 TTACCTCTTTTTAATAGTTTGACCGTGGCAGATGATTTGACAACATTGATTAAGAAGATG 2598 Query 6559 ATGGATAATTCTTCAGGACAAGGATTAGATGATTATTCCA---GAGTTTCTTATGCGAAC 6615 ||||||| || | ||| ||| || | || | | | ||| | ||| ||| Sbjct 2597 ATGGATATATCGAGATCCCAA--ATT-GACACTGATACAAAATCAATTTGTATTGCCAAC 2541 Query 6616 CA-TTTAGATTATGAGAAGTGGAATAACTATCAGCGTATAGAATCCAACGGGCCTACATT 6674 || | ||||| || ||||| ||| |||| | ||| ||||| || ||| Sbjct 2540 CACCTCGGATTACTCAAAATGGAACAACCATCAAAGAGCCGAAGCCAACAACCCAGTATT 2481 Query 6675 CAGAGTAATGGGACAGTTTTTGGGTTATCCTAACCTAATATACAGAACTCATGAATTCTT 6734 ||||||||| | ||| | || ||||| ||| || | | | || ||||| | || Sbjct 2480 TGAAGTAATGGGGAAATTTGTAGGGTATCCCAACTTATTTACCCGCACGCATGAGATTTT 2421 Query 6735 TCAAAAATCTGTGATCTATTATACTCAAAGACCAGATCTAATGATGGTAA-AAGACAATA 6793 |||||| ||| | || || || | |||||||||| | | || |||| | | | Sbjct 2420 TCAAAAGTCTTTAATTTACTACTGAGATAGACCAGATCAACTTATAGTAACCACAGATGG 2361 Query 6794 AGATAATC-AATAAAACAGAGAATGTAGTAGTTTGGGAAGGGCAATTGGGTGGGTTCGAG 6852 ||| |||| | | | | | || ||| | | |||| | |||||| || || || || Sbjct 2360 AGA-AATCGAGTCACAAGGGGATTGTTTTTG-TTGGAATGGGCAAGATGGGGGTTTAGAA 2303 Query 6853 GGAATTCGACAAAAGGGATGGAGTATATTGAATGCACTTTCTGTGGAAAGAGAAAGCAGG 6912 || | | |||||||||||||||||| | ||| ||| | | || |||| || Sbjct 2302 GGGCTGAGGCAAAAGGGATGGAGTATAGTTAATTTACTGGTTATAGATAGAGTAA----- 2248 Query 6913 AATT-TAAATACGAGAGTTACACTACTGGCACAGGGCGACAACCAAATAATATGTTCCAA 6971 |||| |||||| | |||| | | |||| ||||| || || ||| || ||| | | Sbjct 2247 AATTCGAAATACAAAAGTTGGAGTGTTGGCTCAGGGAGATAATCAAGCCATTTGTACTCA 2188 Query 6972 TTACAAA 6978 |||||| Sbjct 2187 ATACAAA 2181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36108586792832