Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_033034.1 Length=13000 Score E Sequences producing significant alignments: (Bits) Value seq5447 87.8 1e-13 seq3346 82.4 6e-12 >seq5447 Length=4366 Score = 87.8 bits (96), Expect = 1e-13 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 7956 GAATTTTTAAAAGCAATTAATGATGTCGGATTATCCTGGGATGATTTGGTCATCGGACTG 8015 ||||| ||| || || ||||||| |||||| ||| ||| | || ||||| Sbjct 2825 GAATTCTTACAAAAGATAAATGATGAAGGATTAGATAATGATAATTACATAATTGGACTC 2766 Query 8016 AAAGAAAAGGAGCGGGAATTGAAAACAGCAGGACGTTTCTTTTCATTAATGTCTTGGAAG 8075 |||| || || | ||| | ||| || || | | ||||| ||||||||||| || Sbjct 2765 AAAGCTAAAGAAAGAGAAGTAAAAGAAGAGGGTAGATATTTTTCCCTAATGTCTTGGGAG 2706 Query 8076 CTGAGAGAATATTTTGTAATAACTGAATATCTCATAAAAACCTTTTATGTCCCTCTTTTT 8135 ||||||||||||| || | || ||||| ||||| |||| | ||| | ||||||||| Sbjct 2705 ATGAGAGAATATTTCGTGGTTACCGAATACCTCATTAAAAAATATTACTTACCTCTTTTT 2646 Query 8136 TATGGATTAACAATGGCTGATGACTT 8161 || | || || |||| ||||| || Sbjct 2645 AATAGTTTGACCGTGGCAGATGATTT 2620 >seq3346 Length=1548 Score = 82.4 bits (90), Expect = 6e-12 Identities = 182/267 (68%), Gaps = 12/267 (4%) Strand=Plus/Minus Query 8343 AGAACACACGAATTTTTTGAGAAAAGCCTGATTTATTATGGATATTATCCAGAATTATTG 8402 || ||||| ||| | ||| | ||| ||||||||||| || | ||||| ||| Sbjct 935 AGGACACATGAAATCTTTAAAAAATCATTGATTTATTATCGAGACAGACCAGACAAATTA 876 Query 8403 AGTGT---TGTAAATGGGGAAGTTGCAAATAATTCTGATAAACGAGTGTGCTGGAATGGC 8459 || || | | ||||| | ||| | | || || || | | | |||||| |||| Sbjct 875 AGGGTCACTCAAGATGGGAAGATTGAATCTGAT---GACAACCTATTTTGCTGGGATGGT 819 Query 8460 CAGGCAGGAGGGCTGGAAGGGTTACGTCAGAAGGGATGGAGCATTTTAAACTTATTGGTA 8519 || | || || || ||||| ||| | || ||||| ||||| ||| | || ||| || || Sbjct 818 CAAGATGGGGGACTTGAAGGATTAAGACAAAAGGGGTGGAGTATTGTTAATTTACTGATA 759 Query 8520 ATTAGGAGAGAAGGAGCTCAT--CGAAATACACAAGT-GAGATGTCTAGCTCAAGGAGAC 8576 || |||||| ||| || ||||| ||| || | | | | | |||||||||||||| Sbjct 758 ATAGATAGAGAA--AGCAAATTACGAAACACAAAAATTGGGGTAT-TAGCTCAAGGAGAC 702 Query 8577 AATCAGGTTATCTGCACCTTATACAAA 8603 || || || || |||||| ||||||| Sbjct 701 AACCAAGTCATATGCACCCAATACAAA 675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 41440485055088