Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_033070.1 Length=11145 Score E Sequences producing significant alignments: (Bits) Value seq5447 150 1e-32 seq64995 96.9 2e-16 seq79413 80.6 2e-11 >seq5447 Length=4366 Score = 150 bits (166), Expect = 1e-32 Identities = 387/579 (67%), Gaps = 23/579 (4%) Strand=Plus/Minus Query 6147 AGCGACTAATTGGCCCAAGTTTTTGAAACAGGTTAATGACACAGGTATATCAGAAGATCA 6206 || ||| |||||||| | || || || || | ||||| ||| || | ||| | Sbjct 2841 AGAGACAAATTGGCCGGAATTCTTACAAAAGATAAATGATGAAGGATTAGATAATGATAA 2782 Query 6207 TCTGATCATTGGATTAAGAGCAAAAGAGCGAGAACTTAAAGAAGAAGGAAGGTTCTTTGC 6266 | || |||||| | | ||| ||||| ||||| | |||||||| || || | ||| | Sbjct 2781 TTACATAATTGGACTCAAAGCTAAAGAAAGAGAAGTAAAAGAAGAGGGTAGATATTTTTC 2722 Query 6267 ACTTATGTCTTGGGAAATCAGAGATTATTTTGTGATGACAGAGTATCTTATCAAAACACA 6326 || ||||||||||| || ||||| ||||| ||| | || || || || || |||| | | Sbjct 2721 CCTAATGTCTTGGGAGATGAGAGAATATTTCGTGGTTACCGAATACCTCATTAAAAAATA 2662 Query 6327 CTTTGTACCTCTGTTCAAAGGTCTGACAATGGCAGACGATTTGACAACTGTAATCGGAAA 6386 | ||||||| || || || |||| ||||||| ||||||||||| | || || Sbjct 2661 TTACTTACCTCTTTTTAATAGTTTGACCGTGGCAGATGATTTGACAACATTGATTAAGAA 2602 Query 6387 AATTTTAGAGA-ATACAGAGGGACAAGGAGAAACAGGGTATGAGAATATCA----CGGTT 6441 || | || | || ||| ||| || || | || | || |||| || Sbjct 2601 GATGATGGATATATCGAGA-TCCCAAATTGACACTG---AT-ACAAAATCAATTTGTATT 2547 Query 6442 TCAAACCATAT-AGATTACGAGAAATGGAACAACCACCAAAGGAAAGAGGCCAATAATCC 6500 | ||||| | |||||| |||||||||||||| ||||| || ||||| || || Sbjct 2546 GCCAACCACCTCGGATTACTCAAAATGGAACAACCATCAAAGAGCCGAAGCCAACAACCC 2487 Query 6501 TGTGTTTGATGTAATGGGGAAATTCCTTGGCTACCCCAACCTTATCT-CACGTACCCATG 6559 || ||||| |||||||||||||| | || || ||||| ||||| | | || || |||| Sbjct 2486 AGTATTTGAAGTAATGGGGAAATTTGTAGGGTATCCCAA-CTTATTTACCCGCACGCATG 2428 Query 6560 AAATATTCGAAAAGTCCTGGATGTATTATAATCAGAGGGGAGATTTGATCGGAGTCAATA 6619 | || || ||||||| | || || || | || |||| | ||| | | Sbjct 2427 AGATTTTTCAAAAGTCTTTAATTTACTACTGAGATAGACCAGATCAACTTATAGTAACCA 2368 Query 6620 GAGATGGAGTGAT--ATTCAATAAGGATAAAAACAAGAGAGTTTGTTGGATTGGGCAAGA 6677 |||||||| || | || | |||| | | ||||||||| ||||||||| Sbjct 2367 CAGATGGAGAAATCGAGTC-ACAAGG-------GGATTGTTTTTGTTGGAATGGGCAAGA 2316 Query 6678 AGGTGGACTAGAAGGATTGAGACAAAAGGGATGGAGTAT 6716 || || ||||||| |||| ||||||||||||||||| Sbjct 2315 TGGGGGTTTAGAAGGGCTGAGGCAAAAGGGATGGAGTAT 2277 >seq64995 Length=2604 Score = 96.9 bits (106), Expect = 2e-16 Identities = 169/240 (70%), Gaps = 11/240 (5%) Strand=Plus/Plus Query 6130 ACTTTAT-TAAAACAGCCAGCGACTAATTGGCCCAAGTTTTTGAAACAGGTTAATGACAC 6188 |||||| |||||| || | ||||| ||||||| ||||| ||| || ||||| Sbjct 1091 ACTTTAAATAAAACTGCTACCGACT----GGCCCAAATTTTTAAAAAGAGTAAATGATT- 1145 Query 6189 AGGTATATCAG--AAGATCATCTGATCATTGGATTAAGAGCAAAAGAGCGAGAACTTAAA 6246 ||| || | || ||||| | | || || || || ||||| |||||| ||| ||||| Sbjct 1146 AGGGAT-TGAGTAAAGATGAGTTAATAATAGGGTTGAGAGCTAAAGAGAGAGG--TTAAA 1202 Query 6247 GAAGAAGGAAGGTTCTTTGCACTTATGTCTTGGGAAATCAGAGATTATTTTGTGATGACA 6306 |||| | || ||||||| | | ||||||||| | |||||||||||||| || ||| Sbjct 1203 AGAGAACGTAGATTCTTTGTATTGATGTCTTGGACTTTAAGAGATTATTTTGTCATAACA 1262 Query 6307 GAGTATCTTATCAAAACACACTTTGTACCTCTGTTCAAAGGTCTGACAATGGCAGACGAT 6366 ||||| ||| | || |||| | | || | || ||| || | || ||||| || ||| Sbjct 1263 GAGTACCTTTTAAAGGAACACATACTTCCATTATTTAAAAGTATAACTATGGCTGATGAT 1322 >seq79413 Length=4423 Score = 80.6 bits (88), Expect = 2e-11 Identities = 150/217 (69%), Gaps = 5/217 (2%) Strand=Plus/Plus Query 6151 ACTAATTGGCCCAAGTTTTTGAAACAGGTTAATGACACAGGTAT--ATCAGAAGATCATC 6208 ||||||||||| ||||| | ||| | |||||||| || | |||| |||| | | Sbjct 931 ACTAATTGGCCAGAGTTTATTAAAAAAGTTAATGATGTTGGACTTGATCA--AGATGAAC 988 Query 6209 TGATCATTGGATTAAGAGCAAAAGAGCGAGAACTTAAAGAAGAAGGAAGGTTCTTTGCAC 6268 | || || || | ||||| ||||| ||||| | |||| |||||||| | || ||| Sbjct 989 TAATTATAGGGCTTAGAGCTAAAGAAAGAGAA-TAAAAGTTGAAGGAAGATATTTCGCAT 1047 Query 6269 TTATGTCTTGGGAAATCAGAGATTATTTTGTGATGACAGAGTATCTTATCAAAACACACT 6328 | ||||| ||| | |||| || ||||| || ||||||||||| | || | | Sbjct 1048 TGATGTCGTGGCCTTTATGAGAATACTTTGTTATTACAGAGTATCTATTAAAGGAATATA 1107 Query 6329 TTGTACCTCTGTTCAAAGGTCTGACAATGGCAGACGA 6365 || | ||| | |||| | | |||||||||||||| Sbjct 1108 TTCTCCCTTTATTCAGTAGCATAACAATGGCAGACGA 1144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35510826016428