Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_033313.1 Length=1789 Score E Sequences producing significant alignments: (Bits) Value seq13688 109 6e-21 >seq13688 Length=1992 Score = 109 bits (120), Expect = 6e-21 Identities = 542/835 (65%), Gaps = 36/835 (4%) Strand=Plus/Minus Query 618 GATAAAAATAAAATTAGAGCTACTTGGGGTTACCCGTTGTCAGTATTTCTGACAGAAGCT 677 |||||||| ||||| ||||| ||||| || || || ||||| | || | ||||| Sbjct 1588 GATAAAAACAAAATAAGAGCCGTGTGGGGATATCCATTAGAAGTATATATGGCTGAAGCC 1529 Query 678 CAATATTTCTATCCTATACTGAAAGAGCTAAA-ACAGCGAGATAAGCCAAAGATAGCTTA 736 ||||||||||||||| || | | |||| | ||| | ||| |||| ||||| || Sbjct 1528 GCATATTTCTATCCTATCCTCGACGTCTTAAAGAAAGCTA-ATAGACCAATAATAGCCTA 1470 Query 737 TGGAGTTGAAATTGGAACAGGAGGCATGGGCTTCTTAAACGAGATGGCGTCTTATTATAA 796 ||| |||||||| || | || |||||| | | ||| | |||| ||| Sbjct 1469 TGGCGTTGAAATAGGTAATGGGGGCATGACATATGTCAACAAAATGGTTGAGAGCTATCC 1410 Query 797 AACTAACAATTTCCTGATTGGTGATTGGAGAAAATTTGATAAGACAATTCCAGCTTGGTT 856 | | || | | | ||||||||||||| ||||| | || |||||||| ||| | Sbjct 1409 ATCAAAACCTGTATTACTTGGTGATTGGAGTGGTTTTGACCATACTATTCCAGCGTGGCT 1350 Query 857 AATAAGAGATGC-TTTCAGAATG-ATCATGCGACACATAGATCTAACCAAAGT--TCAAT 912 || |||| || ||| ||| | ||| || | || ||| | | |||| | || Sbjct 1349 TATCCGAGACGCATTTAAGATTTTATC-TGA-ATGTATTGATTTTAATCAAGTCGTGGAT 1292 Query 913 CAACTGGTGGAAGAATATGGCCAGTTAGAGCTTCAAAGACGAAG-AAGCGCC--TCGCA- 968 || | || | || ||| || || | |||| || || |||| | || Sbjct 1291 --ACCGAAGGTAAAACTTGGA-AGGTA---CGTCAACATCGGTCTAATCGCCGATGGCGG 1238 Query 969 AAATTAATCAATTATTTTATAGATACACCAGTACAATTAAGTAGTGGCGAGCGATTTGTA 1028 ||| |||| | |||||||| || || ||| ||| |||||| ||| ||||| ||| Sbjct 1237 AAAATAATAGAGTATTTTATCGACACGCCAATACGCCTAAGTAATGGTGAGCGGTTTAAG 1178 Query 1029 AAACATGGCGGTGTACCATCAGGTTCATCGTTCACTAATCTGATAGATGGAATAGTTAAC 1088 |||||| | || |||| ||||| |||| || || || | || || ||||||||| Sbjct 1177 AAACATTGTGGAATACCTTCAGGATCATGTTTTACAAACGTCATTGACTCAATAGTTAAT 1118 Query 1089 GCAATTGTTACTAGATATACAGTGTATTCAATGACGGGA-GAACTCC-CGTAT-GATGAC 1145 || |||||| ||||| || ||| ||| |||||| | ||| || | ||| | Sbjct 1117 GCCATTGTTGTGAGATACCTCGTTTATGAAATAACGGGAAGTTTTCCTCGCAGCGAT-AT 1059 Query 1146 TTATACCTAGGTGACGATATAGTTGCTGTAACAAA-GAAGCCATTGGATCTGCATTTATT 1204 |||| |||| || || ||||| || ||| | || || || | ||| Sbjct 1058 TTATT--TAGGAGATGACTCAGTTGTCGTTCTTCCTGAATCTATCA-ATTTGGAAACATT 1002 Query 1205 TGCAGAAATAGCTGAAAAGCAATTTTCAATGATCTTCAATCCAGATAAAAGTTATCAAAC 1264 |||||| | ||| | || |||| |||||| |||||| || || ||| || Sbjct 1001 CGCAGAACTGGCTTTACAGGAATTCGGAATGATTTTCAATGTTGAAAAGAGTGC----AC 946 Query 1265 ATCTCAGAAGGAGAATA----TACATTTCCTCGGCTATTACAATATACATGGTATGCCGT 1320 | ||| | |||| | ||||||||||||| ||||| |||| ||| | || Sbjct 945 AGGTCATGAATAGAAAACTTGTACATTTCCTCGGGTATTATAATAATAGTGGAACACCCG 886 Query 1321 ACAAACCAGTGGATACAGTGATTGCATCATCTATATATCCTGAGCGACCATGCGAA-ACT 1379 | ||||| | |||| | ||||||||| | || ||||||||| | || | ||| | Sbjct 885 AGAAACCTCTCGATAGTATAATTGCATCAACAATCTATCCTGAGAGGACA-GTGAATGAT 827 Query 1380 AAATTTGAAACGATAACTCGGTTAATCGGACAAGCTTATTCATGCTTCGAACCTG 1434 ||| ||||||| ||| | | || || || || |||||||| ||||| ||||||| Sbjct 826 AAACTTGAAACCATATCAAGATTGATAGGTCAGGCTTATTCCTGCTTTGAACCTG 772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5610334154490