Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_033701.1 Length=11743 Score E Sequences producing significant alignments: (Bits) Value seq5447 95.1 9e-16 seq3346 93.3 3e-15 >seq5447 Length=4366 Score = 95.1 bits (104), Expect = 9e-16 Identities = 220/325 (68%), Gaps = 15/325 (5%) Strand=Plus/Minus Query 6706 ATTGGACTGAAGGGAAAAGAGAGAGAAGTTAAA-AGGATTGGTCGAtttttttCACTAAT 6764 |||||||| || | ||||| |||||||| ||| | || ||| ||| |||||| ||||| Sbjct 2774 ATTGGACTCAAAGCTAAAGAAAGAGAAGTAAAAGAAGAG-GGTAGATATTTTTCCCTAAT 2716 Query 6765 GTCTTGGGAACTACGAATGTACTTTGTAGTAACGGAATACTTGATTAAAAAGTTTTTTGT 6824 ||||||||| | || || || || || || |||||| | |||||||| | || | Sbjct 2715 GTCTTGGGAGATGAGAGAATATTTCGTGGTTACCGAATACCTCATTAAAAAATATTACTT 2656 Query 6825 ACCTTTGTTCTCAGGTTTAACAATGGCCGACGATT--ACAATTCAGTAATTAAGAAAATG 6882 |||| | || |||| || |||| || |||| |||| || | |||||||| ||| Sbjct 2655 ACCTCTTTTTAATAGTTTGACCGTGGCAGATGATTTGACAA--CATTGATTAAGAAGATG 2598 Query 6883 TTGGACCGGGCGACAGGTCAAGGTGAATCTGAT----TACCAGTATATAACATTTGCAAA 6938 |||| ||| | ||| ||| ||||| | || | | || |||| || Sbjct 2597 ATGGATATATCGAGATCCCAAATTGACACTGATACAAAATCAATTTGTA----TTGCCAA 2542 Query 6939 TCA-TTTTGACTATTCGAAATGGAACAATACTCAACGAGGGGCTGCCAATGACCCAGTCT 6997 || | || || || ||||||||||| |||| ||| | ||||| ||||||| | Sbjct 2541 CCACCTCGGATTACTCAAAATGGAACAACCATCAAAGAGCCGAAGCCAACAACCCAGTAT 2482 Query 6998 TCCTTGTCATGGGTAAATTTTTAGG 7022 | || ||||| |||||| |||| Sbjct 2481 TTGAAGTAATGGGGAAATTTGTAGG 2457 >seq3346 Length=1548 Score = 93.3 bits (102), Expect = 3e-15 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 7145 TTTGTTGGATTGGTCAAAAGGGAGGCCTAGAGGGATTAAGACAAAAAGGATGGAGCATTG 7204 |||| ||| ||||||| | || || || || |||||||||||||| || ||||| |||| Sbjct 832 TTTGCTGGGATGGTCAAGATGGGGGACTTGAAGGATTAAGACAAAAGGGGTGGAGTATTG 773 Query 7205 TAAGTTTGCTTATGATTGAGAGAGAAAGCAAGATCCGTAATACCCTAATCAAAGTCCTAG 7264 | | ||| || || || || ||||||||||| | || || || ||| || ||| Sbjct 772 TTAATTTACTGATAATAGATAGAGAAAGCAAATTACGAAACACAAAAATTGGGGTATTAG 713 Query 7265 CACAAGGAGATAATCAAGTGATCTGC 7290 | |||||||| || ||||| || ||| Sbjct 712 CTCAAGGAGACAACCAAGTCATATGC 687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 37422381868244