Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_033705.1 Length=11731 Score E Sequences producing significant alignments: (Bits) Value seq5447 104 2e-18 >seq5447 Length=4366 Score = 104 bits (114), Expect = 2e-18 Identities = 350/535 (65%), Gaps = 25/535 (5%) Strand=Plus/Minus Query 6469 ATCGGTCTCAAAGGTAAAGAAAGAGAGGTCAAACGGGTTGGACGATATTTTTCATTGATG 6528 || || ||||||| |||||||||||| || ||| | || |||||||||| | ||| Sbjct 2774 ATTGGACTCAAAGCTAAAGAAAGAGAAGTAAAAGAAGAGGGTAGATATTTTTCCCTAATG 2715 Query 6529 TCCTGGAACCTAAGACTATATTTTGTTTTAACTGAATTTCTTATTAAACGATATTACGTT 6588 || ||| | | ||| |||||| || | || |||| || |||||| ||||||| | Sbjct 2714 TCTTGGGAGATGAGAGAATATTTCGTGGTTACCGAATACCTCATTAAAAAATATTACTTA 2655 Query 6589 CCCTTATTTAGTGGATTGACAATGGCAGATGATTTTAACACCGTTATTCGAAAGTTACTA 6648 || | |||| | | ||||| ||||||||||||| | || | ||| ||| | | Sbjct 2654 CCTCTTTTTAATAGTTTGACCGTGGCAGATGATTTGACAACATTGATTAAGAAGATGATG 2595 Query 6649 GATCGGACCATGGGACAAGGAGGC-CTGACATACGAATATATCACAT----TAGCCAATC 6703 ||| | | ||| | | ||| |||| || |||| | | ||||| | Sbjct 2594 GATATATCGAGATCCCAAATTGACACTG--ATACAAA---ATCAATTTGTATTGCCAACC 2540 Query 6704 A-TTTTGATTACTCCAAATGGAATAACACTCAACGAGGAAAAGCAAATAATCCTGTCTTT 6762 | | |||||||| |||||||| ||| |||| ||| |||| || || || || ||| Sbjct 2539 ACCTCGGATTACTCAAAATGGAACAACCATCAAAGAGCCGAAGCCAACAACCCAGTATTT 2480 Query 6763 AAAGTTATGGGTCAATTTTTGGGGTTGCCCAATCTCTTTGTAAGGACTCATGAATTCTTT 6822 |||| ||||| ||||| | |||| ||||| | ||| | || ||||| | ||| Sbjct 2479 GAAGTAATGGGGAAATTTGTAGGGTATCCCAACTTATTTACCCGCACGCATGAGATTTTT 2420 Query 6823 GAGCAAAG--TTTGATCTATTATAATGAAAGAACAGACTTGATGAGAGTTAGAGGAGGTG 6880 | |||| ||| || || || || ||| |||| | | ||| | || || Sbjct 2419 CA--AAAGTCTTTAATTTACTACTGAGATAGACCAGATCAACTTATAGTAACCACAGATG 2362 Query 6881 ----AGTTGA-TACCAACGACGGATGCTAAAGTCTGTTGGAATGGTCAATTGGGAGGATT 6935 | | || | ||| | |||| | | ||||||||||| ||| || || || Sbjct 2361 GAGAAATCGAGTCACAAGG--GGATTGT---TTTTGTTGGAATGGGCAAGATGGGGGTTT 2307 Query 6936 AGAGGGCCTGAGACAGAAGGGGTGGAGTGTAGTCAGTCTACTAGTTATTGAAAGA 6990 ||| || ||||| || ||||| |||||| |||| | | |||| ||||| || ||| Sbjct 2306 AGAAGGGCTGAGGCAAAAGGGATGGAGTATAGTTAATTTACTGGTTATAGATAGA 2252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 37384022887940