Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mengenilla_20moldrzyki_20[genbank_20GCA_5F000281935.1_202012-07-27] 94,953 sequences; 155,727,465 total letters Query= NC_033731.1 Length=12548 Score E Sequences producing significant alignments: (Bits) Value seq5447 113 4e-21 seq79413 98.7 8e-17 >seq5447 Length=4366 Score = 113 bits (124), Expect = 4e-21 Identities = 314/464 (68%), Gaps = 21/464 (5%) Strand=Plus/Minus Query 6170 ACGAACTGGCCTGAATTCCTCGAAAAGATTGATAAAGAAGGGCTTGATTGGGAGTCGCTA 6229 || || ||||| |||||| | ||||||| || | ||||| | ||| || | || Sbjct 2837 ACAAATTGGCCGGAATTCTTACAAAAGATAAATGATGAAGGATTAGATAATGA-TAATTA 2779 Query 6230 G-TAATAGGTCTAAGAGCTAAAGAAAGAGAATTAAAATTAACAGGG-AGGTTTTTTGCTT 6287 |||| || || | |||||||||||||||| ||||| || |||| || | |||| | Sbjct 2778 CATAATTGGACTCAAAGCTAAAGAAAGAGAAGTAAAAG-AAGAGGGTAGATATTTTTCCC 2720 Query 6288 TAATGTCTTGGGAGTTGAGAGAGTATTTTGTTATAACTGAGTGGCTCATAAAGAAGTATT 6347 |||||||||||||| ||||||| ||||| || | || || | ||||| || || |||| Sbjct 2719 TAATGTCTTGGGAGATGAGAGAATATTTCGTGGTTACCGAATACCTCATTAAAAAATATT 2660 Query 6348 TCGTTCC-GTTACTAAGAGACTTAACAATGGCAGACGACTTGA-ATGATGTCATAAGTAA 6405 | | || || ||| || || || ||||||| || |||| | || | || | || Sbjct 2659 ACTTACCTCTTTTTAATAG-TTTGACCGTGGCAGATGATTTGACAACAT-TGATTAAGAA 2602 Query 6406 AATGTTGTCTAGTACATCAGGA---CAAGGGTTG--GATGACTACTCAGT-AGTATCTAT 6459 ||| || || ||| || ||| ||| ||| ||| | | | | | ||| Sbjct 2601 GATGATG---GATATATCGAGATCCCAA--ATTGACACTGA-TACAAAATCAATTTGTAT 2548 Query 6460 TTCTAACCA-CTTAGATTACGAGAAATGGAACAATCACCAAAGGAAGGAATCAAATGATC 6518 | | ||||| || |||||| ||||||||||| || ||||| ||| | || | | Sbjct 2547 TGCCAACCACCTCGGATTACTCAAAATGGAACAACCATCAAAGAGCCGAAGCCAACAACC 2488 Query 6519 CTGTATTCAGAGTGATGGGTCAATTTTTGGGAAAGCCTAACTTATTCACTAGGACACATG 6578 | ||||| ||| ||||| ||||| | || | || |||||||| || | || |||| Sbjct 2487 CAGTATTTGAAGTAATGGGGAAATTTGTAGGGTATCCCAACTTATTTACCCGCACGCATG 2428 Query 6579 AGTTTTTCGAGAAATCGTTGATTTATTATGTTGATAGACCTGAT 6622 || |||| | || || || ||||| || |||||||| ||| Sbjct 2427 AGATTTTTCAAAAGTCTTTAATTTACTACTGAGATAGACCAGAT 2384 >seq79413 Length=4423 Score = 98.7 bits (108), Expect = 8e-17 Identities = 118/159 (74%), Gaps = 1/159 (1%) Strand=Plus/Plus Query 6227 CTAGTAATAGGTCTAAGAGCTAAAGAAAGAGAATTAAAATTAACAGGGAGGTTTTTTGCT 6286 ||| | ||||| || ||||||||||||||||||| ||| || | ||| || | ||| || Sbjct 988 CTAATTATAGGGCTTAGAGCTAAAGAAAGAGAATAAAAGTTGA-AGGAAGATATTTCGCA 1046 Query 6287 TTAATGTCTTGGGAGTTGAGAGAGTATTTTGTTATAACTGAGTGGCTCATAAAGAAGTAT 6346 || ||||| ||| || |||| || |||||||| || |||| || ||||| | ||| Sbjct 1047 TTGATGTCGTGGCCTTTATGAGAATACTTTGTTATTACAGAGTATCTATTAAAGGAATAT 1106 Query 6347 TTCGTTCCGTTACTAAGAGACTTAACAATGGCAGACGAC 6385 | | || ||| | || | ||||||||||||||||| Sbjct 1107 ATTCTCCCTTTATTCAGTAGCATAACAATGGCAGACGAC 1145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 39995630130304