Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mochlonyx_20cinctipes_20[genbank_20GCA_5F001014845.1_202015-05-28] 95,131 sequences; 441,264,227 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq94936 298 1e-78 >seq94936 Length=2959 Score = 298 bits (330), Expect = 1e-78 Identities = 318/419 (76%), Gaps = 23/419 (5%) Strand=Plus/Minus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| || | |||||||||| | || ||||||||| ||||||| |||||||||| Sbjct 1491 CGCGGGAACTCCGCATCTTCACGGAGAATTCAATTTCGCTGAGTCGATACTGGAGACAGC 1432 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 | | ||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1431 GGGGAAATCGTTACGCCATTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 1372 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180 |||||||||| || ||||||||||||||| || ||| |||| || ||||||| || Sbjct 1371 TTAGGACCGTCATAGTTACGGCCGCCGTTCACTGGGACTTCAATTCAGAGCTT-GC---- 1317 Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240 ||||| | |||| ||||| |||| |||||||||||| ||||||||| || || Sbjct 1316 ----ACCCCTCCTCTTAATCTTCCAGCACTGGGCAGGCGTCAGACCCTATACTTCGTCTA 1261 Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 300 | | ||||||||| ||||||||||||||||||||||| | ||| || | | | ||| Sbjct 1260 TTGACTTTGCAGAGCCCTGTGTTTTTAATAAACAGTCGCTACCCCCTAGTTTGTGCCACC 1201 Query 301 GGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACG 360 || | | || | | | |||| || ||||||||||||||||| Sbjct 1200 --TATAA----ATGG--------TTGCCCATTCACAGGTCATCCTTCTCCCGAAGTTACA 1155 Query 361 GTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACC 419 | | |||||||||||||||| | |||||||||||||||| ||||| ||||||| Sbjct 1154 GATGCAATTTGCCTAGTTCCTTCAGCATCGTTCTCTCAAGCGCCTAGGTATACTCTACC 1096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1259600588352