Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mochlonyx_20cinctipes_20[genbank_20GCA_5F001014845.1_202015-05-28] 95,131 sequences; 441,264,227 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq94936 194 4e-47 >seq94936 Length=2959 Score = 194 bits (214), Expect = 4e-47 Identities = 297/417 (71%), Gaps = 20/417 (5%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||| ||||||| || ||||| |||||||| |||||| | || | ||||| ||||| || Sbjct 948 CGATTACGCCTTTCAGCCTCACCTTAGGAGCCGACTAAGCCTGCGCAGATTAACTTTACG 889 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACC--CGTCACACGCTACTCATGCC 118 | |||||||||||| |||||| | ||| ||| | | | ||||||| ||| | Sbjct 888 CAGGAACCCTTGGACTTTCGGCGAGAATGTTTCTCACATTCTTTAT-CGCTACTTATGTC 830 Query 119 TGCATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCA-CTGACAC 177 ||||||||||| | | ||||| || || |||| || |||||| || || Sbjct 829 AGCATTCTCACTTCCGATACCTCCAGCAAACT-TCACAGTTCACCTTCACAGGCTTACGG 771 Query 178 GACGCTCCCCTACCCAACCACACAGGT----TGCCA-----CAGCTTCGGCGGATAACTT 228 ||||||| ||||| | | ||| | ||| | || |||||| || |||| Sbjct 770 AACGCTCCGCTACC-ATCTGCACTATTAAAGTGCAAATCCGCATCTTCGGTACATGACTT 712 Query 229 AAGCCCCGCTACATTATCGGCGCGGAATCACTT-----GACCAGTGAGCTATTACGCACT 283 ||||||| |||||| | ||||| | | |||| ||| ||||||||||||||| | Sbjct 711 GAGCCCCGTTACATTGTTGGCGCAGGAAAACTTATTTAGACTAGTGAGCTATTACGCTTT 652 Query 284 CTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTT 343 |||| || |||||||||||| |||||||| |||| ||||| | | |||||||||| Sbjct 651 CTTTAAATGATGGCTGCTTCTAAGCCAACATCCTAGTTGTTTTGGTTTTCCCACATCCTT 592 Query 344 TCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 | |||| ||||| | |||||| |||||| || | |||||||| ||||||||||| Sbjct 591 TAACACTTAGTCATGATTTAGGGACCTTAGATGGCGGTCTGGGCTTTTTCCCTCTCG 535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1176479737344