Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mochlonyx_20cinctipes_20[genbank_20GCA_5F001014845.1_202015-05-28] 95,131 sequences; 441,264,227 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq94936 336 7e-90 >seq94936 Length=2959 Score = 336 bits (372), Expect = 7e-90 Identities = 371/484 (77%), Gaps = 15/484 (3%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTG---TAGACCCGAAACCAAGTGATCTACCC 58 |||||| ||| ||||||| | | | | || ||||||||||||| ||||||||| || Sbjct 197 CGAGTCTGAATAGGGCGATTTTAGTTAGATGAATTAGACCCGAAACCGAGTGATCTAGCC 256 Query 59 ATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAA 118 ||||||||| |||||||| |||| | | ||| ||| |||||||||||| ||||||||| Sbjct 257 ATGGCCAGGTTGAAGGTGGAGTAATATCCGCTGAAGGACCGAACCCACTACTGTTGAAAA 316 Query 119 ATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTC 178 | ||||||||||||||||| ||||||||||||||||| |||||| ||| ||||||||||| Sbjct 317 AGTAGGGGATGAGCTGTGGCTAGGGGTGAAAGGCTAATCAAACTCGGATATAGCTGGTTC 376 Query 179 TCTCCGAAAACTATTTAGGTAGTGCCTCA-AG-TATCACCATCGGGGGTAGAGCACTGTT 236 || ||||| |||||||||||| || | | || || ||| ||| |||||||||||| Sbjct 377 TCCGCGAAATCTATTTAGGTAGAGCGTTATAGCGATTACCGTCGAAGGTAGAGCACTG-G 435 Query 237 ATG-GCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTT 295 ||| ||||||||||| | |||||||||||| ||||||||||||| | || Sbjct 436 ATGAGCTAGGGGGTCCTACAGACTTACCAAACTCAACCAAACTCCGAATGTCGACGAG-- 493 Query 296 TTACCGC--GGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCG 353 ||| || | || || ||||||||||||||| | ||||||| || | || Sbjct 494 -TACAGCATAGCAGACAGACTGTGGGTGCTAAGGTCCATAGTCGAGAGGGAAAAAGCCCA 552 Query 354 GACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAA 413 ||| || |||||| ||| |||| | |||||| | || || || || | || Sbjct 553 GACCGCCATCTAAGGTCCCTAAATCATGACTAAGTGTTA--AAGGATGTGGGAAAACCAA 610 Query 414 GACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACT 473 ||| ||||||||||||||| |||||||||| ||||||||||| |||||| |||||||| Sbjct 611 AACAACTAGGATGTTGGCTTAGAAGCAGCCA-TCATTTAAAGAAAGCGTAATAGCTCACT 669 Query 474 AGTC 477 |||| Sbjct 670 AGTC 673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1687992666624