Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mochlonyx_20cinctipes_20[genbank_20GCA_5F001014845.1_202015-05-28] 95,131 sequences; 441,264,227 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq93959 201 2e-49 >seq93959 Length=1071 Score = 201 bits (222), Expect = 2e-49 Identities = 192/241 (80%), Gaps = 5/241 (2%) Strand=Plus/Minus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||| |||||||||||||||| | ||||||||||||||||| || ||||||| Sbjct 444 AGAGCATTTGGTGGATGCCTTGGCACTAGAAGGCGATGAAGGACGTAATACGCTGCGATA 385 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 |||| ||||||| || || | |||||||||| |||||||||||||||||||||| | Sbjct 384 AGCTTCGGGGAGCT-GCGAATAAGCTTTGATCCGAAGATTTCCGAATGGGGAAACCCACC 326 Query 121 C-CTTTG--GGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGA 177 ||| | ||| || | || ||||||||||| ||||| |||| ||| | ||||| ||| Sbjct 325 TGCTTAGCAGGT-ATCGTATAGTGAATACATAGCTATGCGAAGCAAACCCAGCGAATTGA 267 Query 178 AACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGA 237 || |||| |||||||| |||||| || ||||||||||| ||| ||||||| ||||||| Sbjct 266 AATATCTTAGTAGCTGGAGGAAAGGACATCAACCGAGACTCCGTTAGTAGTGACGAGCGA 207 Query 238 A 238 | Sbjct 206 A 206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 917526316896