Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mochlonyx_20cinctipes_20[genbank_20GCA_5F001014845.1_202015-05-28] 95,131 sequences; 441,264,227 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq94936 349 1e-93 >seq94936 Length=2959 Score = 349 bits (386), Expect = 1e-93 Identities = 419/567 (74%), Gaps = 23/567 (4%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTC-ACCACCTGATTGC 59 ||| ||||| || |||||||||| ||| ||| ||| || ||||| | | ||||| | Sbjct 1811 TCGTCTTGTCAGACTCGCAGTCAGGCTAGCTTATGCCATTGCACTCTAATAGTTGATTTC 1752 Query 60 CAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCA 119 | |||| ||||| |||| | | ||||||||||||| ||||||||| | ||||||||| Sbjct 1751 CGACCAACCTGAGCTAACCATCGCGCGCCTCCGTTACTCTTTGGGAGG-CGACCGCCCCA 1693 Query 120 GTTAAACTACCCACCAGGCACTGTCCCCAACCCAGAT-CATGGGCCAAGGTTAGATATCC 178 || ||||||||||||| ||| |||| | | || ||| || || | ||||||||||| Sbjct 1692 GTCAAACTACCCACCATGCATTGTCTCGGATCCTGATTCAAGGATCGCGGTTAGATATCA 1633 Query 179 ACTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATA 238 | | || ||||||| |||| ||||||||| || ||| |||| ||||| Sbjct 1632 AGAATCAAAAGGGTGGTATCTCAAGGGTGACTCCACAGTGGCTTGCGCCACCGCTTCATA 1573 Query 239 GTCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTC 298 |||||||||||||||| |||| || ||| ||| | | |||||||||| ||||| Sbjct 1572 GTCTCCCACCTATCCTGCACATCTAATTCCTAATACCAGTGCAAAGCTATAGTAAAGGTT 1513 Query 299 C-CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCAC 357 | |||||||||| |||| ||||| ||| ||||||| || | | ||||||| | Sbjct 1512 CACGGGGTCTTTCCGTCTAACCGCGGGAACTCCGCATCTTCACGGAGAATTCAATTTCGC 1453 Query 358 CGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTAC 417 | | | | | |||||||| ||| | |||||||||||||||||| ||||||||||||| Sbjct 1452 TGAGTCGATACTGGAGACAGCGGGGAAATCGTTACGCCATTCGTGCGGGTCGGAACTTAC 1393 Query 418 CCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCT 477 ||||||||||||||||||||||||||| || |||||||| |||||||| |||||| || Sbjct 1392 CCGACAAGGAATTTCGCTACCTTAGGACCGTCATAGTTACGGCCGCCGTTCACTGGGACT 1333 Query 478 TCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCAC 537 |||||| || | | | ||| ||||||||| |||||||||| Sbjct 1332 TCAATT----------CAGAGCTTG---------CACCCCTCCTCTTAATCTTCCAGCAC 1292 Query 538 CGGGCAGGCGTCAGTCCGTATACCTCG 564 ||||||||||||| || ||||| ||| Sbjct 1291 TGGGCAGGCGTCAGACCCTATACTTCG 1265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1700780489856