Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= AAMG01001645.1 Length=355 Score E Sequences producing significant alignments: (Bits) Value seq4128 205 2e-50 >seq4128 Length=13886 Score = 205 bits (226), Expect = 2e-50 Identities = 214/281 (76%), Gaps = 0/281 (0%) Strand=Plus/Minus Query 30 GTGCCGTCGGGCTCGTCGGTGCGCCTGGACTACAGCGAACAGCCGCCGATCCTGGCGGTG 89 |||||||| || ||| | ||| | || ||| | || || |||||||| |||||| Sbjct 11356 GTGCCGTCTGGTTCGAATATCCGCATCGATTACTCGCAGCATCCACCGATCCTCGCGGTG 11297 Query 90 CGCCTGCAGGAATTGTTCGGCCTGGCGGACACACCGCGCATTGCCGGCGGGCGCCAGGTG 149 | |||||||| |||| |||||||| || ||||| ||||| ||| | | ||| | Sbjct 11296 AGGCTGCAGGAGCTGTTTGGCCTGGCAGAAACACCACGCATAGCCCAGAGCAGGCAGCCG 11237 Query 150 GTCAAGTTGCACCTGCTGTCCCCGTCGCGCAGGCCGGTGCAGGTGACCCAGGATCTGGCG 209 | | |||| || ||||| ||| | || ||||| |||||||| || |||||||||||| Sbjct 11236 CTGATTCTGCATCTTCTGTCGCCGGCTCGTAGGCCCGTGCAGGTTACTCAGGATCTGGCG 11177 Query 210 AACTTCTGGCGCAGTACCTACGCCGAGGTGAAGAAGGATCTGAAGGGGCGGTATCCGAAG 269 ||||||||||| || ||||| | ||||||||||||||| ||||||| | || || ||| Sbjct 11176 AACTTCTGGCGAAGCACCTATGTAGAGGTGAAGAAGGATTTGAAGGGTAGATACCCCAAG 11117 Query 270 CATTATTGGCCGGATGATCCGTTGGTGGCCGAAGCGACGGC 310 ||| ||||||| || ||||| ||||| || ||||||||||| Sbjct 11116 CATCATTGGCCTGAAGATCCATTGGTTGCTGAAGCGACGGC 11076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1033474562304