Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= AAMG01001693.1 Length=610 Score E Sequences producing significant alignments: (Bits) Value seq4128 318 2e-84 seq2247 304 5e-80 seq6732 86.0 2e-14 >seq4128 Length=13886 Score = 318 bits (352), Expect = 2e-84 Identities = 375/505 (74%), Gaps = 7/505 (1%) Strand=Plus/Minus Query 22 GGTGTGGTGCGGCGACCTCCCCTACATCTGGGCCCATGGGAAATGGCATTACCTGGCTGT 81 ||| ||||| || ||| || | ||| ||||||| || || |||||||| || ||||| || Sbjct 8563 GGTCTGGTGTGGAGACATCACTTACGTCTGGGCACAGGGCAAATGGCACTATCTGGCGGT 8504 Query 82 CGCGCTGGATCTTTGCTCGCGCCGGGTGGTGGCTTGGGCGTTGACCAGACACCCCGGACG 141 | |||||||| | | ||| | ||||| | |||||| || | |||| | ||||| | Sbjct 8503 TGTCCTGGATCTGTATGCACGCAGAGTGGTTGGTTGGGCCTT-ATCAGAAAAGCCGGATG 8445 Query 142 CCGATCTGGCTATGCGGGCGCTGGATATGGCTTACCAGCCTGCACGACGA---CCTCATG 198 || |||| | |||||||| | || ||| | | ||| || ||||| | Sbjct 8444 GAGACCTGGTGGTCAAAGCGCTGGACGTCGCCTACGAACA---ACGTGGAAAGCCTCAAG 8388 Query 199 GTCTGCTGGTTCACTCGGATCAAGGGTCGCAGTATGCGAGTCGTTTATTTCGCCAGCGGC 258 | || ||| | ||||| || || || ||||| |||| || |||| || |||||| | | Sbjct 8387 GACTCCTGTTCCACTCCGACCAGGGATCGCAATATGGCAGCCGTTAGTTCCGCCAGAGAC 8328 Query 259 TGTGGCGTTATCGCATGCGCCAGAGCATGAGTCGCCGGGGAAATTGCTGGGACAATGCGC 318 ||||||| || |||||||||||||||||||| ||||| || || || ||||| ||||| | Sbjct 8327 TGTGGCGCTACCGCATGCGCCAGAGCATGAGCCGCCGAGGCAACTGTTGGGATAATGCAC 8268 Query 319 CAATGGAGCGCGTGTTCCGCAGCTTGAAAACGGAGTGGATACCGACCACGGGTTACCGAA 378 | |||||||| || || ||||| |||||| | |||||||||||||||||||| |||| | Sbjct 8267 CGATGGAGCGAGTATTTCGCAGTTTGAAATCAGAGTGGATACCGACCACGGGCTACCTGA 8208 Query 379 CGGCTCAAGAAGCCCAGCGCGATATCAGCCAATTCTTAATGCATCGGTACAACTGGATTC 438 | | || |||| || || || || |||||| | | ||| | ||||||||||| | Sbjct 8207 CCGGGCAGCAAGCTCAACGAGACATTGGCCAATACCTGATGGGCCACTACAACTGGATCC 8148 Query 439 GCCCCCATCGATTCAACGGTGGGCTGGCGCCAGCTCGGGCCGAAGAAAAACTTAACGTCG 498 | || |||| ||||||| ||| ||||| ||||| || |||||||||||||| || Sbjct 8147 GGCCGCATCAGTTCAACGATGGACTGGCTCCAGCGAAAGCTGAAGAAAAACTTAAAACCG 8088 Query 499 TGTCCGGGATTAGTTGACCACTACA 523 |||||||||| |||||||||||||| Sbjct 8087 TGTCCGGGATGAGTTGACCACTACA 8063 >seq2247 Length=25848 Score = 304 bits (336), Expect = 5e-80 Identities = 379/514 (74%), Gaps = 9/514 (2%) Strand=Plus/Minus Query 14 CCCACCCCGGTGTGGTGCGGCGACCTCCCCTACATCTGGGCCCATGGGAAATGGCATTAC 73 |||| | ||||||||| |||||| || ||||| ||||||| || || ||||| ||| Sbjct 25781 CCCAATCAGGTGTGGTGTGGCGACATCACCTACGTCTGGGCGCAAGGCCGTTGGCACTAC 25722 Query 74 CTGGCTGTCGCGCTGGATCTTTGCTCGCGCCGGGTGGTGGCTTGGGCGTTGACCAGACAC 133 ||||| | | ||||||||| | || |||||| | | |||||||| | | || Sbjct 25721 CTGGCCGCGGTGCTGGATCTGCATACCCGGCGGGTGATCGGCTGGGCGTTCTCG-GCCAA 25663 Query 134 CCCGGACGCCGATCTGGCTATGCGGGCGCTGGATATGGCTTAC---CAGC-CTGCACGAC 189 ||||| ||||| |||| || ||| ||||| ||||| ||| |||| | ||| | | Sbjct 25662 GCCGGATGCCGAACTGGTGATCAAGGCCCTGGACATGGCCTACGAACAGCGCGGCAAGCC 25603 Query 190 GACCTCATGGTCTGCTGGTTCACTCGGATCAAGGGTCGCAGTATGCGAGTCGTTTATTTC 249 || || | ||||| | || || || || || ||||| || || || | |||| Sbjct 25602 -ACAGCAGG---TGCTGTTCCATTCAGACCAGGGCAGCCAGTACGCCAGCCGCCTGTTTC 25547 Query 250 GCCAGCGGCTGTGGCGTTATCGCATGCGCCAGAGCATGAGTCGCCGGGGAAATTGCTGGG 309 | || ||||| ||||| ||||| |||| ||||||||||||||||| || |||||||||| Sbjct 25546 GGCAACGGCTCTGGCGCTATCGGATGCAGCAGAGCATGAGTCGCCGAGGGAATTGCTGGG 25487 Query 310 ACAATGCGCCAATGGAGCGCGTGTTCCGCAGCTTGAAAACGGAGTGGATACCGACCACGG 369 | || |||| ||||||||| |||||||||| |||| |||||||| | ||| | |||| Sbjct 25486 ATAACTCGCCGATGGAGCGCCTGTTCCGCAGTCTGAAGTCGGAGTGGGTCCCGTCAACGG 25427 Query 370 GTTACCGAACGGCTCAAGAAGCCCAGCGCGATATCAGCCAATTCTTAATGCATCGGTACA 429 ||||||| ||||| || || ||||| || || ||||| | | ||| ||||| || |||| Sbjct 25426 GTTACCGGACGGCGCAGGAGGCCCAACGGGACATCAGTAATTACTTGATGCACCGCTACA 25367 Query 430 ACTGGATTCGCCCCCATCGATTCAACGGTGGGCTGGCGCCAGCTCGGGCCGAAGAAAAAC 489 ||||||| | || |||| ||| |||| ||| | | || || |||||||||||||| Sbjct 25366 ACTGGATCAGGCCGCATCAATTTAACGACGGGTTACCACCTGCGGTGGCCGAAGAAAAAC 25307 Query 490 TTAACGTCGTGTCCGGGATTAGTTGACCACTACA 523 | ||| |||||||||| ||||||||||||| Sbjct 25306 TCAACCCACTGTCCGGGATGGGTTGACCACTACA 25273 >seq6732 Length=16230 Score = 86.0 bits (94), Expect = 2e-14 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 288 AGTCGCCGGGGAAATTGCTGGGACAATGCGCCAATGGAGCGCGTGTTCCGCAGCTTGAAA 347 |||||||| || ||||||||||| || |||| ||||||||| |||||||||| |||| Sbjct 1 AGTCGCCGAGGGAATTGCTGGGATAACTCGCCGATGGAGCGCCTGTTCCGCAGTCTGAAG 60 Query 348 ACGGAGTGGATACCGACCACGGGTT 372 |||||||| | ||| | ||||||| Sbjct 61 TCGGAGTGGGTCCCGTCAACGGGTT 85 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1846168918424