Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= AAMG01001997.1 Length=304 Score E Sequences producing significant alignments: (Bits) Value seq5924 104 4e-20 >seq5924 Length=3311 Score = 104 bits (114), Expect = 4e-20 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 153 AGAGCATCAGCCGCACGACCGACTCACTCGGATCGCGGGTTTTACCAGCGGCTTTGAGCT 212 ||||||||||| ||||||||||| || ||||| | || || ||| |||| Sbjct 2882 AGAGCATCAGCTTGACGACCGACTCGTCGGGGTCGCGCGACTTGCCGGCGCTGGCCAGCT 2941 Query 213 CGGCCAGGTAGTCGGCCCACAAAGCGTCCTGACGTACGGCCAACTGATAGAGGTAGTCCC 272 | ||||||||||||||||| | ||||| || |||| || || |||||||||| Sbjct 2942 CCGCCAGGTAGTCGGCCCATAGCTGGTCCTTGCGGGTCGCCAGCTCGTACAGGTAGTCCC 3001 Query 273 AGGTGAACAGTCCGCTGTCATGACCGTCGTCG 304 |||||||||| |||||||| || ||||||||| Sbjct 3002 AGGTGAACAGGCCGCTGTCGTGGCCGTCGTCG 3033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 870294368256