Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= AAMG01002051.1 Length=353 Score E Sequences producing significant alignments: (Bits) Value seq5649 113 9e-23 >seq5649 Length=1543 Score = 113 bits (124), Expect = 9e-23 Identities = 247/362 (68%), Gaps = 21/362 (6%) Strand=Plus/Plus Query 1 CGACCGCCTGCGCCATGTGGCGGAGCGCGCCGAGCTGGGTGAAGGCCGCGAAGCGATCAT 60 |||||||||||| ||||| || ||||||||| | || || ||||| || || | Sbjct 586 CGACCGCCTGCGTTTCGTGGCCGAACGCGCCGAGGTCGGCGAGATGCGCGAGGCCGTCTT 645 Query 61 CGCCGTGACCATTCCCGAGAAGCCCGGCAGCTTCAAGGCG-TTCTGCGAGGCCGTGGGCA 119 |||||| ||||| || || ||| |||||||||| | || |||||||| || ||| Sbjct 646 CGCCGTCACCATGCCGGAACAGCGCGGCAGCTTC-CGCCGCTTCTGCGAACTGGTCGGCG 704 Query 120 AGCGCCAGATCACCGAATTCAACTACCG--TTTCC-ACTCCGGCAGCGAGGCGCACATCT 176 ||||| | ||||||||||| ||||| | ||| | |||| | || || || ||| Sbjct 705 AGCGCAGCGTGACCGAATTCAATTACCGCATCTCCGATTCCGACCGC---GCCCATGTCT 761 Query 177 TTGTCGGCGTGCAG--ACCCACCCCGACACCGACCCCCGCAGCGCGCTGATCGCCAGCC- 233 | |||||| ||||| | | ||| ||||| ||| ||| ||| ||| ||| Sbjct 762 TCGTCGGCCTGCAGGTTTCAGCGCCG--ACCGAACCCGACAG------GATTGCCGGCCA 813 Query 234 --TGACCGAGCAGGGTTTCCCGGTGCTGGACCTGACCGAGAATGAGCTGGCCAAGCTGCA 291 | | || || ||| |||||||||||| | |||| |||||||| || Sbjct 814 CTTCCGCCGCCATGGCTTCGATACGCTGGACCTGACGCACGATGAAATGGCCAAGACCCA 873 Query 292 CATCCGCCATATGGTCGGCGGCCATGCGGCGCACGTCAGCAATGAAGTGGTGTTCCGCTT 351 | | ||||| ||||||||||||| ||||||| | || | || || ||| |||||| Sbjct 874 CTTGCGCCACATGGTCGGCGGCCGCTCGGCGCAGGCGCGCGACGAGTTGCTGTACCGCTT 933 Query 352 CG 353 || Sbjct 934 CG 935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027075339008