Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq9251 306 1e-80 seq1478 275 2e-71 seq1536 269 9e-70 seq8829 172 2e-40 seq8823 170 6e-40 seq3519 147 7e-33 seq877 131 5e-28 seq2986 118 3e-24 seq9061 109 2e-21 seq7829 84.2 7e-14 >seq9251 Length=4726 Score = 306 bits (338), Expect = 1e-80 Identities = 218/249 (88%), Gaps = 1/249 (0%) Strand=Plus/Plus Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGG-CTCCCAC 243 || ||||||| ||||||| | ||||||||||||||| ||| | | ||||||| Sbjct 130 GAGTAAGTAAGGAAACGATGAAAGTAGTGGTATTTCACCGGCGATGTTGCCATCTCCCAC 189 Query 244 TTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 303 |||| |||||||||||| ||| | ||| | | ||||||||||||||||||||||||| Sbjct 190 TTATGCTACACCTCTCATGTCTGCTTACAGTGCCAGACTAGAGTCAAGCTCAACAGGGTC 249 Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363 ||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||| Sbjct 250 TTCTTTCCCCGCTAATTTTTCCAAGCCCGTTCCCTTGGCAGTGGTTTCGCTAGATAGTAG 309 Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 310 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 369 Query 424 ATTTGGCTA 432 ||||||||| Sbjct 370 ATTTGGCTA 378 >seq1478 Length=8230 Score = 275 bits (304), Expect = 2e-71 Identities = 211/249 (85%), Gaps = 1/249 (0%) Strand=Plus/Plus Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGG-CTCCCAC 243 || ||||||| ||||||| | ||| |||| |||||| ||| | | ||||||| Sbjct 4025 GAGTAAGTAAGGAAACGATGAAAGTAATGGTTTTTCACCGGCGATGTTGCCATCTCCCAC 4084 Query 244 TTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 303 |||| |||||||||||| ||| | | |||| | | ||||||||||||||||||||||||| Sbjct 4085 TTATGCTACACCTCTCATGTCTTCTTACAATGCCAGACTAGAGTCAAGCTCAACAGGGTC 4144 Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363 || |||| | ||| ||| ||||||||||||||||||| |||||| ||||||||||||| Sbjct 4145 TTTTTTCTCTGCTAATTTTTCCAAGCCCGTTCCCTTGGCAGTGGTTACGCTAGATAGTAG 4204 Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 423 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | || Sbjct 4205 ATAGGGACAGTGGAAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACAAAGC 4264 Query 424 ATTTGGCTA 432 ||||||||| Sbjct 4265 ATTTGGCTA 4273 Score = 113 bits (124), Expect = 1e-22 Identities = 97/120 (81%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||| ||| ||| ||||||| ||| |||| ||||||||||||||||||||| Sbjct 3790 CTTTTGCTTTACGCGAGGTTTCTGTCCTCGCTGAGCTGCCCTTAGGACACCTGCGTTATT 3849 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||||||| ||| ||||| |||||||||| |||| || |||| || | |||||| Sbjct 3850 CTTTGACAGATGTACCGTCCCAGTCAAACTCCCCGCCTGGCAGTGTCCTCGAATCGGATC 3909 >seq1536 Length=3993 Score = 269 bits (298), Expect = 9e-70 Identities = 210/249 (84%), Gaps = 1/249 (0%) Strand=Plus/Plus Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGG-CTCCCAC 243 || ||||||| ||||||| | ||||||||||||||| ||| | | ||||||| Sbjct 1735 GAGTAAGTAAGGAAACGATGAAAGTAGTGGTATTTCACCGGCGATGTTGCTATCTCCCAC 1794 Query 244 TTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 303 |||| |||||||||||| ||| | |||| | | || ||| ||||||||||| |||||| Sbjct 1795 TTATGCTACACCTCTCATGTCTCCTTACAATGCCAGATTAGTGTCAAGCTCAATAGGGTC 1854 Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363 |||||| ||| || ||| |||||| |||||||||||| |||||||||||||||||||| Sbjct 1855 TTCTTTTCCCCCTAATTTTTCCAAGCTCGTTCCCTTGGCAGTGGTTTCGCTAGATAGTAG 1914 Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 423 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct 1915 ATAGGGACAGTGGGAATCTCGTTAATCCGTTCATGCGCGTCACTAATTAAATGACGAGGC 1974 Query 424 ATTTGGCTA 432 |||| |||| Sbjct 1975 ATTTTGCTA 1983 Score = 114 bits (126), Expect = 4e-23 Identities = 96/118 (81%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 9 TTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGT 68 |||||||||| ||| ||||||| ||| |||| |||||||||||||||||||| | Sbjct 1502 TTTGCTCTACGCGAGGTTTCTGTCCTCGCTGAGCTGGCCTTAGGACACCTGCGTTATTCT 1561 Query 69 TTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 || |||||||| ||||||||| |||||||||| |||| || |||| || | |||||| Sbjct 1562 TTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGGCAGTGTCCTCGAATCGGATC 1619 >seq8829 Length=2175 Score = 172 bits (190), Expect = 2e-40 Identities = 98/100 (98%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct 1854 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCTTGAATTTCTTCACGTT 1913 Query 494 GACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||||||||||||||||||| Sbjct 1914 GACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 1953 >seq8823 Length=3514 Score = 170 bits (188), Expect = 6e-40 Identities = 97/99 (98%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct 341 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCTTGAATTTCTTCACGTTG 282 Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||||| Sbjct 281 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 243 >seq3519 Length=4426 Score = 147 bits (162), Expect = 7e-33 Identities = 89/94 (95%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 338 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct 4420 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTAATTTTTCCAAGCCCGTTCCCT 4361 Query 339 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACA 372 |||| ||||||||||||||||||||||||||||| Sbjct 4360 TGGCAGTGGTTTCGCTAGATAGTAGATAGGGACA 4327 >seq877 Length=9795 Score = 131 bits (144), Expect = 5e-28 Identities = 77/80 (96%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6517 AGTAAATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 6458 Query 419 GAGGCATTTGGCTACCTTAA 438 |||||||||||||| |||| Sbjct 6457 GAGGCATTTGGCTATTTTAA 6438 >seq2986 Length=3172 Score = 118 bits (130), Expect = 3e-24 Identities = 98/120 (82%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| ||| ||||||| ||| |||| |||||||||||||||||||| Sbjct 191 CTTTTGCTCTACGTGAGGTTTCTGTCCTCGCTGAGCTGGCCTTAGGACACCTGCGTTATT 250 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||||||| ||||||||| |||||||||| |||| || |||| || | |||||| Sbjct 251 CTTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGGCAGTGTCCTCGAATCGGATC 310 Score = 80.6 bits (88), Expect = 9e-13 Identities = 46/47 (98%), Gaps = 0/47 (0%) Strand=Plus/Plus Query 328 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGT 374 ||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 417 GCCCGTTCCCTTGGCAGTGGTTTCGCTAGATAGTAGATAGGGACAGT 463 >seq9061 Length=5999 Score = 109 bits (120), Expect = 2e-21 Identities = 65/68 (96%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 466 CCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTG 525 |||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 675 CCCGCGCTTGCTTAAATTTCTTCACATTGACATTCAGAGCACTGGGCAGAAATCACATTG 616 Query 526 CGTCAACA 533 |||||||| Sbjct 615 CGTCAACA 608 >seq7829 Length=4387 Score = 84.2 bits (92), Expect = 7e-14 Identities = 48/49 (98%), Gaps = 0/49 (0%) Strand=Plus/Plus Query 379 ATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTT 427 |||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 2152 ATCTCGTTAATCCATTCATGTGCGTCACTAATTAGATGACGAGGCATTT 2200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635001552128