Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq10678 116 3e-21 >seq10678 Length=68604 Score = 116 bits (128), Expect = 3e-21 Identities = 126/167 (75%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 ||||| ||||| || || |||||||| || ||||| || || |||||| | | ||| | Sbjct 45327 CATGTCTTGGCATTTTTCGCCGCTTCTGATGGTATTGTTAACGAGAATCTGATTGAAAGA 45386 Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323 ||| ||||||||| |||| | || || |||||||||||||||||||| || ||||| Sbjct 45387 TTCAGTCAGGAGGTGAAAGTCGCTGAAGCACGTTGTTTCTACGGCTTCCAAATGGCCATA 45446 Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACAT 61370 |||||| | || || || ||||| | | ||||| || || || || Sbjct 45447 GAGAATATTCATTCCGAAATGTATTCTTTGCTCATTGAAACTTATAT 45493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397509196711040