Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22]
12,136 sequences; 257,976,923 total letters
Query= NC_011356.1
Length=54896
Score E
Sequences producing significant alignments: (Bits) Value
seq7345 91.5 5e-14
>seq7345
Length=15758
Score = 91.5 bits (100), Expect = 5e-14
Identities = 165/239 (69%), Gaps = 2/239 (1%)
Strand=Plus/Plus
Query 46062 TCCAGGTGCCGTCAAACTATGACCCGGAAAAACGCACGTACAGCGGCATCTGGGACGGCA 46121
|||| |||||| || || || ||||| | || | ||| |||||||||||||||||
Sbjct 8005 TCCAAGTGCCGAGCAATTACGATCCGGAGACCCGGGCCTACCTCGGCATCTGGGACGGCA 8064
Query 46122 GCCTGAAACCGGCATACAGCAACAACCCGGCCTGGTGCCTGTGGGACATGCTGACTCACC 46181
|||||| ||| | | | ||||||||| |||| | | ||||| |||| ||
Sbjct 8065 CGATGAAACAGGCCTGGACCGACAACCCGGTCTGGCACACCTACGACATCGTGACCAACG 8124
Query 46182 CGCGCTACGGCATGGGAAAACGCCTGGGGGCGGCGGAT-GTGGACAAGTGGGCGCTGTAT 46240
|||| ||| |||| |||||| | ||| |||| || ||| |||| | ||||
Sbjct 8125 ATCGCTTCGGTGTGGGTAAACGCATCAAGGC-CTGGATGGTAGACCGTTGGGAGATGTAC 8183
Query 46241 GCCATTGCGCAGTACTGCGACCAGATGGTCCCTGATGGTTTCGGGGGCACAGAGCCGCG 46299
||| | ||||||||||||||| |||| || ||||| || ||| ||||||||
Sbjct 8184 CGGATTTCCCAGTACTGCGACCAGTTGGTGCCGGATGGGAAGGGTGGCCAGGAGCCGCG 8242
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 175520301245856
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |