Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Musca_20domestica_20[refseq_20GCF_5F000371365.1_202013-04-22]
20,487 sequences; 750,403,944 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq19022 129 2e-27
seq9795 111 7e-22
>seq19022
Length=51908
Score = 129 bits (142), Expect = 2e-27
Identities = 116/146 (79%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||| | |||||| |||| ||||||||||| | | |||||| ||||||
Sbjct 29747 GAGTCGTGTTGCTTGATAGTGCAGCACTAAGTGGGAGGTAAACTCCATCTAAAACTAAAT 29806
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
|| | ||||||||||| |||||| |||| ||||| ||||||| ||| || |
Sbjct 29807 ATAACCATGAGACCGATAGTAAACAAGTGCCGTGAGGGAAAGTTGAAAAGAACTCTGAAT 29866
Query 160 AGAGAGTTAAAAAGCACGTGAAATTG 185
|||||||||||||| |||||||||||
Sbjct 29867 AGAGAGTTAAAAAGTACGTGAAATTG 29892
Score = 114 bits (126), Expect = 5e-23
Identities = 103/128 (80%), Gaps = 1/128 (1%)
Strand=Plus/Plus
Query 556 AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGG 615
|| ||| ||||| |||||||||| ||||||||||| | |||| ||| ||||| ||| |
Sbjct 30399 AGTATATATGTTGTGACCCGAAAGGTGGTGAACTATACTTGAACAGGTTGAAGTCAGGGA 30458
Query 616 AAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTAT 675
|||| ||| |||| | || | | |||||| ||||||||||||| |||| | ||| ||||
Sbjct 30459 AAAC-CTGATGGAAGACCGAAACAGTTCTGACGTGCAAATCGATTGTCAGAATTGAGTAT 30517
Query 676 AGGGGCGA 683
||||||||
Sbjct 30518 AGGGGCGA 30525
>seq9795
Length=415624
Score = 111 bits (122), Expect = 7e-22
Identities = 102/129 (79%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614
|| |||| || || || ||||| ||||||||||||| | ||| ||| ||||| ||| |
Sbjct 338417 GATCATATATGCTGTGAACCGAACGATGGTGAACTATACTTGATCAGGTTGAAGTCAGGG 338358
Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674
||||| ||| |||| | || | | |||||| ||||||||||||| |||| | ||| |||
Sbjct 338357 GAAACCCTGATGGAAGACCGAAACAGTTCTGACGTGCAAATCGATTGTCAGAATTGAGTA 338298
Query 675 TAGGGGCGA 683
|||||||||
Sbjct 338297 TAGGGGCGA 338289
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079560553850
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |