Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Musca_20domestica_20[refseq_20GCF_5F000371365.1_202013-04-22] 20,487 sequences; 750,403,944 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq19022 268 3e-69 seq10165 264 3e-68 >seq19022 Length=51908 Score = 268 bits (296), Expect = 3e-69 Identities = 370/513 (72%), Gaps = 45/513 (9%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGAC--CCAAAA-GAGCCCTGTATCAGTATTTATTGTCACTA 57 |||||||||||||||||| | | | || | ||| ||||||| ||||| | ||||||| Sbjct 47806 GTACTCATTCCAATTACAGGGCGTCTAATATGAGTCCTGTATTGTTATTTTTCGTCACTA 47747 Query 58 CCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCC 117 |||||||| | |||| |||| ||||| ||||||||||||||||||| |||||||||||| Sbjct 47746 CCTCCCCGAGCTGGGAGTGGGCAATTTACGCGCCTGCTGCCTTCCTTAGATGTGGTAGCC 47687 Query 118 GTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATG 177 ||||||||||||||| ||||| ||||||||||| |||| ||||||| |||||| Sbjct 47686 GTTTCTCAGGCTCCCCCTCCGCAATCGAACCCTGATTC-------CCCGTTGGAACCATG 47634 Query 178 GTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237 |||| || || |||||||| ||| ||||||||||||| ||||||| || | ||| || Sbjct 47633 GTAGTCCTAGATGCTACCATCAAAAATTGATAGGGCAGACATTTGAAAGATCTGTCGTCG 47574 Query 238 GCTCAAGGCCATGCGATTCGTTAAGTTATTATGAAT--CACCA-AGGAGC-CCCGAAGGG 293 | | || |||| ||| || ||||| | || | |||| | | | | ||| Sbjct 47573 GTACGAGACCATACGA-TCTGCAAGTTTTCTAGAGTTCAACCATATAAACGATCAAAGAT 47515 Query 294 CGTTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTA 353 || | | |||| |||||||| ||| | | || || | |||| Sbjct 47514 CGCTTGGTTTTAGCCTAATAAAAGCACACGTCCCAAAACACAG----TTAG--------- 47468 Query 354 GCTCTAGAATTACCACGGTTATCCATGTAGTAAGGT--ACTATCAAATAAACGATAACTG 411 |||| |||| ||| || || || || ||||| ||| ||||||| Sbjct 47467 ------------CCACAGTTAGCCACGT--TACTGTTAACGATCAAGGGAACCATAACTG 47422 Query 412 ATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCT 471 || ||||||||| || || |||||||||| || | | | ||||||||||||||||||| Sbjct 47421 ATATAATGAGCCTTTTGCGGTTTCACTGT-TAATTCGTGTGTACTTAGACATGCATGGCT 47363 Query 472 TAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||| |||||| ||||| |||||||||| Sbjct 47362 TAATCTTTAAGACAATCATATCTCTACTGGCAG 47330 >seq10165 Length=1137027 Score = 264 bits (292), Expect = 3e-68 Identities = 197/230 (86%), Gaps = 3/230 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAA---GAGCCCTGTATCAGTATTTATTGTCACTA 57 |||||||||||||||||| | || || ||| ||||||| ||||| | ||||||| Sbjct 651190 GTACTCATTCCAATTACAGGGCCTCTAATATGAGTCCTGTATTGTTATTTTTCGTCACTA 651249 Query 58 CCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCC 117 |||||||| | |||| |||||||||| ||||||||||||||||||| ||||||| |||| Sbjct 651250 CCTCCCCGAGCTGGGAGTGGGTAATTTACGCGCCTGCTGCCTTCCTTAGATGTGGCAGCC 651309 Query 118 GTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATG 177 | ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| Sbjct 651310 GCTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTGCAACCATG 651369 Query 178 GTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGA 227 |||| || || |||||||| ||||||||||||||||| ||||||| || Sbjct 651370 GTAGTCCTAGATACTACCATCAAAAGTTGATAGGGCAGACATTTGAAAGA 651419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510090564352