Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Musca_20domestica_20[refseq_20GCF_5F000371365.1_202013-04-22] 20,487 sequences; 750,403,944 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq10186 612 2e-170 seq10162 497 8e-136 >seq10186 Length=270785 Score = 612 bits (678), Expect = 2e-170 Identities = 1278/1893 (68%), Gaps = 43/1893 (2%) Strand=Plus/Plus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| ||||| ||||| || ||||| || || | ||| || | | ||| |||||||| || Sbjct 27527 ATCCACCGTAAACTGAATGGCATTGGCCGCAGGCTTTGTTCGTAAATAATACATGCCCGT 27586 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTC 65196 |||||||||||| ||| | ||||||||| || || | |||||| | ||||| || || Sbjct 27587 CTTGAGGCCAGCCTTCCAGGAATAGAAATGTATGGAAGTCAATTTTCCGTAATTGGGTTC 27646 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 ||| || || ||||| ||||| ||||||||||||||| | |||||||| || ||||| Sbjct 27647 GGCTACGTGTATATTAAACGATTGACTCTGATCGATGAAGGCCCCACGATCGGCGGCCAT 27706 Query 65257 GTCAATGATACGACGTCCCG-ATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAA 65315 | ||| | | | | || | || ||||| ||||| ||||| || || | ||| Sbjct 27707 TTTGATGGTT-GTCTTGACGGAAATTTCCCAAACGGTTTTGTAAAGCTCTCGGATCTCTT 27765 Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCG 65375 | ||||||| ||||| | || | || ||||| | | ||| || ||| ||| Sbjct 27766 TGGGAATCTGTTCAATATTTTGTATAGAGCCACGGCTAGAAATGATCTTATTCTTCATAT 27825 Query 65376 ACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGGA 65435 || ||||||| | | ||| | | || | | ||| || |||||| | | | Sbjct 27826 CTTCATCCCACAAATCAAGTTCGGTCAAATCCTTGAGCAAATGGTGATTGACAATATTAA 27885 Query 65436 ACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAG 65495 | || || || ||||||||||| || || || || ||| ||| ||||| |||||| Sbjct 27886 ATTCACCTGAGAGTACACGACGTGTGTAAATATTCGATGTGTAGGGCTCAAATGATTCAT 27945 Query 65496 TGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTC 65555 | || || | ||| ||||| ||||| ||||| ||||| || || | | ||||||||| | Sbjct 27946 TATTACCCATAATCTGGGCTGTAGAAGCAGTAGGCATTGGTGCTAAGAGCAATGAGTTGC 28005 Query 65556 GCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACA--TCGGTTTATC 65613 ||| || | | | |||| ||| | || |||| | ||||| ||||| | Sbjct 28006 GCACACCATGCTTGGCAATTTTGGCCTTTAGGTCAGCCCAATCCCACAAGTCGGTGGGTA 28065 Query 65614 GTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGAG 65673 | | ||||||||| | || || | || | || | || |||| | Sbjct 28066 CTTTATT--------CCACATATCATACTGAAGAATACCTTTGCTTACAGGGCTACCGGG 28117 Query 65674 GAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAAA 65733 | | || || || || | || || |||| ||| |||| ||| | || || | Sbjct 28118 ATATGTTTCATAGGGACCATCTTTCTCAGCCAGTTCACAACTGGCCTCCAAGGCACCATA 28177 Query 65734 ATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCAT 65793 ||||| || |||||||| | ||||||| | |||| || || || || || Sbjct 28178 GTAAATTGTTTCGAAAATTTGCTGATTAAGCTTGTAGGCCTGTTCACTTTCATAGGGGTA 28237 Query 65794 ACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACG 65853 || |||||| | | ||||| || | |||||| || |||||||| ||||||||||| | Sbjct 28238 ACGCATCAGAATTAGGGTGTCAGCGAAACCTTGTACACCAATACCAATGGGACGATGTCT 28297 Query 65854 CAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAA 65913 || |||||| ||| || || || | || ||||| ||||| || || || ||| | Sbjct 28298 CATATTGGACTTTCTTGCTTCCGGCAATGGATAGTAGTTGATGTCAATGATTTTATTGAG 28357 Query 65914 ATTGCGTGTCACCACAT--GCACGATACGTCGCAATTGTTCGAAATCAAAA-TGTTTAGG 65970 |||||| || || || | || || | || |||| | ||||||| | | ||| Sbjct 28358 ATTGCGCGTAACAACCTTGGCCACATTCTTC--AATTTCTTGAAATCATACGTCTTT--- 28412 Query 65971 ACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGAC 66030 || ||||| ||||||| | || || || || | || || || Sbjct 28413 ----TCTGGAGT---------CACAAACATATTGAGACAAATCGAGGCCAAATTACAAAC 28459 Query 66031 AGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTAT 66090 || || || ||||| || | ||||| |||||||| || |||| ||| ||||| || Sbjct 28460 TGCAATTTCATCAGGTGCCGAGTACTCAACAATTTCTGTACACAAATTGCTGCATTTGAT 28519 Query 66091 GGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGG 66150 ||||| | ||| ||||||||||||||||||||||| || || ||| ||| ||| || || Sbjct 28520 CGTGCCAATATTTTGTTGATTACTCTTGCGATTGCAAGCGTCTTTGAACAGCATATAAGG 28579 Query 66151 AGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGT 66210 || || || || ||||||| || |||||||| ||| || || | || || || || Sbjct 28580 GGTTCCTGTTTCCACTTGGGCTTCGATGATGGCAAACCATAGCGCCTGCGCTTTTACGGT 28639 Query 66211 ACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCA 66270 | || | |||| |||||| | |||||| || | ||| || || ||||| Sbjct 28640 CCTATTGGCTTTGCCTTCCTTTTCGTATTTTTCGTAAAGTTTTTCAAATTCGTCTCCCCA 28699 Query 66271 TACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTC 66330 || || || | ||||| |||||||||||||| |||||||| || |||| || ||| Sbjct 28700 CACATCTTGTAGCCCCGGACATTTGTGTGGACACATTAGCGACCAGTCGCCATTCTCTTC 28759 Query 66331 TACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTG 66390 ||||| |||||| ||||| || ||||| ||||||||||| ||||| | || || || Sbjct 28760 GACACGCTTCATAAACAGATCGGGAATCCAAAGGGCGTAGAAAAGATCTCTGGCACGATG 28819 Query 66391 CTCCTCAATGCC-GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATG 66449 ||| || |||| ||| ||||| || || | |||||||| || || | |||||||| Sbjct 28820 CTCTTCCTTGCCTGTG-TTTTTCTTTAAATCCAAAAACTCAAAAATATCCGAATGCCATG 28878 Query 66450 GTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAG 66509 |||||| |||||||| || | ||| |||||||||||||||||| ||||| || || | Sbjct 28879 GTTCCAAATAGATGGCAAATGCGCCAGGACGTTTGCCGCCACCTTGATCGACATAACGTG 28938 Query 66510 CGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGT 66569 | ||||||||||| || | ||||| || || | || || ||| ||||||| |||||| Sbjct 28939 CAACATTGTTGAATACCCTTAACATGGGCACTAAACCATTGGATGTGCCATTAGTGCCGG 28998 Query 66570 CGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCT 66629 | || | | ||| || |||||| || ||||| | ||||| || ||||||| | Sbjct 28999 CAATAGAAGTTCCCTTGGCGCGTATACAATGGACATTGATGCCAATTCCTCCGGCCGATT 29058 Query 66630 TCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGA 66689 |||| || || || | | || | | ||| || || ||||| || ||| || | Sbjct 29059 TCGATATCATGGCGCACTGTTCAACAGACTTGAAAATACCTTCAATCGAATCAGCCACCA 29118 Query 66690 TGGTCAGGAGGTAGCATGAACTAAGTTGGG---GTTTGGGTGTGGCGGCCGAGAAGAGGG 66746 ||||||||||| | || || || |||| | ||| ||||| || | || || | Sbjct 29119 TGGTCAGGAGGAAACAAGACGACAGCTGGGGGAGATTG---GTGGCAGCAGCAAATAGAG 29175 Query 66747 TGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCAT 66806 | || | ||| || ||||||||| | || | | ||||| ||||||||| |||||| Sbjct 29176 TTGGAGAAGCATGAGTAAAGTAACGTTCCGAAAGCAAGTTGTAAGTCTCGATGGCAGCAT 29235 Query 66807 CAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAGGTATTGAGGCCGTTCG 66865 |||||| ||| ||||| || || | | |||| ||||| || | || |||||||| || Sbjct 29236 CAATGTCTTCACCATGTATGCCCACAGCCACA-CGCATGAGCATGTGTTGAGGCCTCTCC 29294 Query 66866 ACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTAC 66925 | | | | || || | || || || || | ||||| || || | ||||| || Sbjct 29295 GCAATCTTTCCATTCATTTTCAACAAATACGACCTTTCCAATGTTTTAAATCCAAAATAA 29354 Query 66926 GAGTAATTGAAATCGTTAGCATGCACGATGGCC 66958 |||| |||||| | ||| || |||||| Sbjct 29355 TTGTAACCGAAATCACGATCATAAACAATGGCC 29387 >seq10162 Length=1180275 Score = 497 bits (550), Expect = 8e-136 Identities = 598/808 (74%), Gaps = 9/808 (1%) Strand=Plus/Minus Query 61106 AGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACT 61165 |||| || ||||| || ||||| ||||| || || ||| | ||||||||| | | ||| | Sbjct 72162 AGGCAGAGGCTTCATTTTGGACAGTGGAAGAAGTTGATCTCTCCAAAGACTTAACTGATT 72103 Query 61166 GGGAGCGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCG 61225 |||| | ||| | | ||||| ||||||| ||||| |||| || || |||| Sbjct 72102 GGGATAGATTAACAGACAATGAACGCTATTTCATATCTCATGTTCTGGCCTTTTTCGCCG 72043 Query 61226 CTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGT 61285 | || || ||||| |||||||| |||||| | ||||||||| |||| |||||||||||| Sbjct 72042 CCTCTGATGGTATTGTCAATGAAAATTTAGTTGAACGTTTCTCGCAAGAGGTGCAAGTGA 71983 Query 61286 CGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGT 61345 | || || ||||| ||||| |||||||| ||||||||||| ||||| ||||| || |||| Sbjct 71982 CAGAAGCCCGTTGCTTCTATGGCTTCCAAATTGCCATGGAAAATGTTCACTCCGAAATGT 71923 Query 61346 ACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATG 61405 | ||| |||| |||||||| ||||| | ||| || | |||||||| | ||||||| Sbjct 71922 ATAGTATTCTGATCGATACATACATTAAGGACCGCGATCAACGTGAATATCTTTTCAATG 71863 Query 61406 CCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGA--TCAC 61463 |||| || || || || || || ||| ||| || ||||||||||| |||| ||| Sbjct 71862 CCATTGAAACAATGCCAGCCGTTAAGAAGAAGGCCGATTGGGCCTTGTCATGGATTTCAT 71803 Query 61464 CAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATT 61523 ||| | |||||| ||||| ||||| | | || ||||| | || |||||| |||| Sbjct 71802 CAG--AATCGGCTAATTTTGGAGAACGTGTTATTGCGTTTGCTGCCGTTGAGGGTATATT 71745 Query 61524 TTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCT 61583 |||||| || |||||| | ||||||||| | ||||||||||| || ||||| || | Sbjct 71744 TTTCAGCGGTAGTTTTGCCTCCATCTTTTGGCTTAAGAAACGTGGTCTAATGCCTGGCTT 71685 Query 61584 GACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTT 61643 ||| ||| |||||| ||||| || || ||||| ||| |||||||||||||||| || | Sbjct 71684 GACATTCTCCAATGAATTGATCTCGCGTGACGAAGGCTTGCATTGTGATTTTGCCGTACT 71625 Query 61644 GCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCG 61703 | | |||||| ||||||||| | || | || ||| | ||| || | || Sbjct 71624 GATGTTCAAA---TATCTGGTGCAGAAACCCAGCAAAGAACGTATTATTGAAATCATCCG 71568 Query 61704 TGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCA-CTCATCG 61762 || || |||| || ||||||||||| || ||||| ||| || || | | | | || | Sbjct 71567 AGATGCTGTAAAAATTGAACAGGAATTCCTAACTGAAGCTCTG-CCATGTAATTTAATTG 71509 Query 61763 GCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCG 61822 | |||||||||| | |||||||| | |||||||||||||||||||| |||||| |||| | Sbjct 71508 GAATGAATTGTGAATTAATGTCGGAATATATTGAATTTGTTGCCGATCGTCTGCTGGTTG 71449 Query 61823 ATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATTT 61882 | |||| | | ||||| ||||| ||||| || || |||||||| ||||||| Sbjct 71448 AATTGGATGTTGGCAAAATCTACAATACCAAAAATCCTTTCCCCTTCATGGAAATGATTT 71389 Query 61883 CGCTGGATGGCAAGACGAATTTTTTCGA 61910 | ||||||| || || ||||| || || Sbjct 71388 CATTGGATGGTAAAACAAATTTCTTTGA 71361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397468733109680