Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myzus_20persicae_20[genbank_20GCA_5F001856785.1_202016-09-19] 4,020 sequences; 347,296,088 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq2347 138 5e-30 >seq2347 Length=330313 Score = 138 bits (152), Expect = 5e-30 Identities = 102/119 (86%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624 ||||| |||||||||||||||||||||||||| ||| ||||| ||| |||||| ||| Sbjct 19331 GTTGGTACCCGAAAGATGGTGAACTATGCCTGGCCAGGATGAAGTCAGGGGAAACCCTGA 19272 Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||| ||||||| ||||| ||||||||||||||||| | ||||||||||||||| Sbjct 19271 TGGAGGTCCGCAGCGATTCTGACGTGCAAATCGATCGTCTGAGCTGGGTATAGGGGCGA 19213 Score = 123 bits (136), Expect = 1e-25 Identities = 116/145 (80%), Gaps = 2/145 (1%) Strand=Plus/Minus Query 39 CGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAA 98 ||||||| |||| ||| || |||||| | || ||| |||||| | | ||||| |||||| Sbjct 19978 CGAGTCGGGTTGCTTGAGAGTGCAGCCCGAAGCGGGTGGTAAACTCCATCTAAGGCTAAA 19919 Query 99 TATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGG 157 || ||||| ||||||||||| | ||||||| |||| ||||| ||||||| |||||| Sbjct 19918 TAC-GGCCACGAGACCGATAGTGGACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGA 19860 Query 158 AAAGAGAGTTAAAAAGCACGTGAAA 182 | |||||||| | ||| |||||||| Sbjct 19859 AGAGAGAGTTCATAAGAACGTGAAA 19835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079913771000