Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myzus_20persicae_20[genbank_20GCA_5F001856785.1_202016-09-19] 4,020 sequences; 347,296,088 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq40 118 8e-22 >seq40 Length=47542 Score = 118 bits (130), Expect = 8e-22 Identities = 160/223 (72%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 61396 TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAAT 61455 || || ||||| || || || || ||| || || || || |||||||| | || Sbjct 40011 TTATTTAATGCTATTGAAACCATGCCGTGTGTAAAAAAAAAGGCAGATTGGGCTCTGAAG 40070 Query 61456 TGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAG 61515 ||||| | | || | || || ||||||||| |||| | |||||||| | || || Sbjct 40071 TGGATAAGCGATAGTAAAGCGACTTTTGGTGAAAGATTAGTTGCATTTGCTGCCGTTGAA 40130 Query 61516 GGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATG 61575 ||| |||||||| |||| ||||| ||| | |||||| |||||||||| ||| | ||| Sbjct 40131 GGTATATTTTTCTCTGGAAGTTTTGCTGCATTATTTTGGATGAAGAAACGAGGATTAATG 40190 Query 61576 CCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGG 61618 || ||| | || |||||||||||| |||| || | || |||| Sbjct 40191 CCAGGTTTAACTTTCAGCAATGAGCTGATTTCTAGAGATGAGG 40233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397548521652800