Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20giraulti_20[genbank_20GCA_5F000004775.1_202010-01-15] 4,912 sequences; 283,606,953 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq4429 132 4e-26 seq4696 104 2e-17 >seq4429 Length=4547816 Score = 132 bits (146), Expect = 4e-26 Identities = 133/173 (77%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 ||||| ||||| ||||| || || || || ||||| |||||||||||| | | || ||| Sbjct 2612616 CATGTTTTGGCATTCTTCGCTGCCTCAGATGGTATTGTCAATGAGAATCTGGTTGAGCGT 2612675 Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323 ||| ||||| ||||| ||| | ||||| ||||| ||||| ||||||||| | ||||| Sbjct 2612676 TTCAGCCAGGAAGTGCAGGTGACTGAGGCTCGTTGCTTCTATGGCTTCCAGGTGGCCATT 2612735 Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 || || | ||||| || |||||| ||||||| || || |||||||| || Sbjct 2612736 GAAAACATTCACTCTGAAATGTACTCCCTTCTCATTGACACCTACATCAGTGA 2612788 Score = 109 bits (120), Expect = 4e-19 Identities = 164/226 (73%), Gaps = 8/226 (4%) Strand=Plus/Plus Query 61397 TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCG--GAAAGCGGATTGGGCCTTCAA 61454 ||||||| |||||||| || | || | ||| || ||| ||| | |||||| | || Sbjct 2612887 TGTTCAACGCCATCGAAACACTTCC--CTGTGTCGCCAAGAAGGCGAACTGGGCCCTGAA 2612944 Query 61455 TTGGATCAC-CAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCG 61513 ||||||| || | | || | || |||| |||||| || | || || || | |||| Sbjct 2612945 CTGGATCAGTCACGATAGCG-CGACGTTTGCCGAACGAGTGATTGCCTTCGCTGCAGTCG 2613003 Query 61514 AGGGTGTATTTTTCAGTGGATCGTTT-GCCGCAATCTTTTGGTTGAAGAAACGTGGACTT 61572 |||| | |||||||| || | |||| || || || || ||| ||||||| ||||| ||| Sbjct 2613004 AGGGAATCTTTTTCAGCGG-TAGTTTCGCTGCCATTTTCTGGCTGAAGAAGCGTGGTCTT 2613062 Query 61573 ATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGG 61618 ||||| || || |||||||||||||| | || || | ||||||| Sbjct 2613063 ATGCCTGGACTTACCTTCAGCAATGAACTCATTTCTAGGGACGAGG 2613108 >seq4696 Length=9412112 Score = 104 bits (114), Expect = 2e-17 Identities = 274/416 (66%), Gaps = 12/416 (3%) Strand=Plus/Plus Query 65147 GCACGCCAAGCATAGAAATGCATCGATGATAA-TTTTGCATAATTCGGCTCGGCCACATG 65205 || ||||| | ||||| |||||||||| | |||| | | || |||| || | || Sbjct 480608 GCTCGCCAGCCGTAGAAGTGCATCGATGTGAGCTTTTCCGTTGTT-GGCTGAGCTATGTG 480666 Query 65206 CATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCATGTCAATGAT 65265 | ||| | |||||| |||||| ||| | ||| ||||| |||||||| | | || Sbjct 480667 TACATTTAGAGACTGAGACTGATCAATGAAGGCACCTCGATCCGCAGCCATTTTCAAAAT 480726 Query 65266 ACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAATT-----GGA 65320 | ||| ||||||||||| || |||||||| | | |||||| ||| Sbjct 480727 GGTCTTTTGCGAAATCTCCCAGACTGTTTTGTACAG-----TTTCTTCAATTCATCCGGA 480781 Query 65321 ATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCGACTCT 65380 ||| ||| || ||| || ||||| ||| || || ||| |||| ||| Sbjct 480782 ATCCTTGCAAGGTTCTGAACCGAACCGTTGTTTGCGATTATTTCATTCTTCATCTCCTCG 480841 Query 65381 GACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGGAACTCG 65440 ||||| | || || | | || || | ||| ||| |||||| ||||||||| || Sbjct 480842 TCCCACAGATCCCTGTCTGTCAAATCTTTCAACAAATGAGGATTGACGACTTGGAATTCT 480901 Query 65441 CCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGTTG 65500 || || || ||||| | | || |||||| ||| ||| || | ||||| ||||| Sbjct 480902 CCAGAAAGAACACGCCTGGTGTAAATGTTGCTTGTGTAGGGCTCTATCGATTCGTTGTTG 480961 Query 65501 CCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTCG 65556 || | |||||| || || || || |||||||| || || | ||||| || || || Sbjct 480962 CCCAAAATTTGTGCGGTCGAAGCTGTTGGCATTGGCGCAAGTAACAAAGAATTGCG 481017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397544199591680