Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasonia_20vitripennis_20[refseq_20GCF_5F000002325.3_202012-11-28] 6,098 sequences; 295,780,872 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq642 127 9e-27 >seq642 Length=51287 Score = 127 bits (140), Expect = 9e-27 Identities = 106/130 (82%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || |||||||||||||||||||||||||||||||| ||| |||| ||| Sbjct 40215 AGAGCCTACACGTTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGGACGAAGTCAGG 40274 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 |||||| ||| | |||| || |||| ||||| |||| |||||||||||| | ||||| Sbjct 40275 GGAAACCCTGATTGAGGTCCGTAGCGATTCTGACGTGAAAATCGATCGTCGGAACTGGGT 40334 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 40335 ATAGGGGCGA 40344 Score = 109 bits (120), Expect = 2e-21 Identities = 110/143 (77%), Gaps = 5/143 (3%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| || ||||||||||| | | |||||| | | ||||| ||||||| Sbjct 39452 GAGTCGGGTTGCTTGAGAGTGCAGCTCTAAGTTAGTGGTAAACTGCATCTAAGGCTAAAT 39511 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | |||||| |||||| ||||||| |||| ||||| ||||||| |||||| | Sbjct 39512 -----CACGAGACCTATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAAG 39566 Query 160 AGAGAGTTAAAAAGCACGTGAAA 182 ||| |||| || || |||||||| Sbjct 39567 AGACAGTTCAACAGTACGTGAAA 39589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079869197900