Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq48546 107 3e-21 seq41258 107 3e-21 seq39950 87.8 3e-15 >seq48546 Length=2092 Score = 107 bits (118), Expect = 3e-21 Identities = 75/84 (89%), Gaps = 1/84 (1%) Strand=Plus/Minus Query 176 aaTTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAAT 235 || ||||||||||||||||||||| |||||| ||||||||||| ||||| ||||||| | Sbjct 919 AAATAACCAGACAAATCACTCCACGAACTAATAACGGCCATGCTGCACCATCCATAGATT 860 Query 236 CAAGAAAGAGCTATC-AATCTGTC 258 | ||||||||||||| |||||||| Sbjct 859 CGAGAAAGAGCTATCAAATCTGTC 836 Score = 75.2 bits (82), Expect = 2e-11 Identities = 61/74 (82%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 176 aaTTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAAT 235 || |||||| |||||||||||||| |||| |||||| | ||| |||||| |||||| | Sbjct 1023 AAATAACCACACAAATCACTCCACGAACTGAGAACGTCGATGTTGCACCACTCATAGATT 964 Query 236 CAAGAAAGAGCTAT 249 | || ||||||||| Sbjct 963 CGAGCAAGAGCTAT 950 >seq41258 Length=2071 Score = 107 bits (118), Expect = 3e-21 Identities = 75/84 (89%), Gaps = 1/84 (1%) Strand=Plus/Minus Query 176 aaTTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAAT 235 || ||||||||||||||||||||| |||||| ||||||||||| ||||| ||||||| | Sbjct 1808 AAATAACCAGACAAATCACTCCACGAACTAATAACGGCCATGCTGCACCATCCATAGATT 1749 Query 236 CAAGAAAGAGCTATC-AATCTGTC 258 | ||||||||||||| |||||||| Sbjct 1748 CGAGAAAGAGCTATCAAATCTGTC 1725 Score = 98.7 bits (108), Expect = 2e-18 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 176 aaTTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAAT 235 || ||||||||||||||||||||| ||||||||||||||||| |||||| |||||| | Sbjct 1912 AAATAACCAGACAAATCACTCCACGAACTAAGAACGGCCATGTTGCACCACTCATAGATT 1853 Query 236 CAAGAAAGAGCTAT 249 | |||||||||||| Sbjct 1852 CGAGAAAGAGCTAT 1839 Score = 93.3 bits (102), Expect = 7e-17 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 176 aaTTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAAT 235 || |||||| |||||||||||||| ||||||||||||||||| |||||| |||||| | Sbjct 2016 AAATAACCATACAAATCACTCCACAAACTAAGAACGGCCATGTTGCACCACTCATAGATT 1957 Query 236 CAAGAAAGAGCTAT 249 | |||||||||||| Sbjct 1956 CGAGAAAGAGCTAT 1943 >seq39950 Length=3493 Score = 87.8 bits (96), Expect = 3e-15 Identities = 59/65 (91%), Gaps = 1/65 (2%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| |||||||||||||| || ||| |||||||||||||||||||||||||||||| ||| Sbjct 1387 TCATTGTAGCGCGCGTGCAGCTCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC 1445 Query 76 AAACT 80 || || Sbjct 1446 AATCT 1450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795377025507