Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq86840 233 3e-59 seq174170 205 2e-50 seq130549 176 8e-42 seq106339 165 1e-38 seq152177 84.2 4e-14 >seq86840 Length=6006 Score = 233 bits (258), Expect = 3e-59 Identities = 176/206 (85%), Gaps = 1/206 (0%) Strand=Plus/Minus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 ||||| || |||||||||||||||||||| | || ||| ||||| |||||||||| ||| Sbjct 5793 GTCATTAGAAGGGTAAAACTAACCTGTCTTACGATGGTGGAAACCAAGCTCACGTTTCCT 5734 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 | |||||||||||||||||||| ||||| |||||| |||||||||||||||| Sbjct 5733 TGCA-TGGGTGAACAATCCAACGCTCGGTGAATTTTGCTTCACAATGATAGGAAGAGCCG 5675 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 |||||||||||||||||||| |||||| || ||||||||||| ||||||||||||||||| Sbjct 5674 ACATCGAAGGATCAAAAAGCGACGTCGTTAAGAACGCTTGGCCGCCACAAGCCAGTTATC 5615 Query 210 CCTGTGGTAACTTTTCTGGCACCTCT 235 ||||||||| |||| || || |||| Sbjct 5614 TCTGTGGTAATTTTTTTGACATCTCT 5589 >seq174170 Length=1013 Score = 205 bits (226), Expect = 2e-50 Identities = 171/207 (83%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 ||||| ||||||||||||||||||||||||| ||||| ||||| ||| |||||||||| Sbjct 365 GTCATTAGTAGGGTAAAACTAACCTGTCTCACGACGGCTTAAACTCAGTACACGTTCCCT 306 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 | ||||||||||||||||| ||| ||||| | | || |||||| ||||||||| Sbjct 305 -TGCTTGGGTGAACAATCCAACACTTGGTGAATTTTCCCTCACAATGATAAGAAGAGCCG 247 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG-GCTGCCACAAGCCAGTTAT 208 | ||||||| |||||||| ||||||||||||||||||| | | |||||||| |||| Sbjct 246 AAATCGAAGCATCAAAAAATGACGTCGCTATGAACGCTTGACCAGTGACAAGCCAATTAT 187 Query 209 CCCTGTGGTAACTTTTCTGGCACCTCT 235 | |||||| |||||||||| ||||||| Sbjct 186 CTCTGTGGCAACTTTTCTGACACCTCT 160 >seq130549 Length=1596 Score = 176 bits (194), Expect = 8e-42 Identities = 160/202 (79%), Gaps = 11/202 (5%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 ||| |||||||| |||||||||||||| | || || ||||| |||| |||||||||| | Sbjct 1300 CATTAGTAGGGTGAAACTAACCTGTCTTACGATGGCCTAAATCCAGTACACGTTCCCT-T 1242 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 | ||||||||||||| ||| ||| ||||| || ||| | | |||| Sbjct 1241 GAATGGGTGAACAATCTAACACTTGGTGAATTTTGGTTCACAA----------ATCCGAA 1192 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 || ||||||||||||||| |||||||| |||||||||||| |||||| |||||||||||| Sbjct 1191 ATTGAAGGATCAAAAAGCGACGTCGCTGTGAACGCTTGGCCGCCACAGGCCAGTTATCCC 1132 Query 212 TGTGGTAACTTTTCTGGCACCT 233 |||| |||||||||| ||||| Sbjct 1131 TGTGACAACTTTTCTGACACCT 1110 >seq106339 Length=1566 Score = 165 bits (182), Expect = 1e-38 Identities = 125/146 (86%), Gaps = 1/146 (1%) Strand=Plus/Minus Query 40 GGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGT 99 ||||||||| ||||||||||| ||| |||||||||||||||||||||||| | ||||| Sbjct 1002 GGGTAAAACCAACCTGTCTCACGACAGTCTAAACCCAGCTCACGTTCCCTTGCA-TGGGT 944 Query 100 GAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGG 159 |||||||||||||||| |||| | |||| ||| | |||||||||| |||||||| Sbjct 943 GAACAATCCAACGCTTGGTAAATTTTACTTCACAATGTTGCGAAGAGCCGAAATCGAAGG 884 Query 160 ATCAAAAAGCAACGTCGCTATGAACG 185 |||||||||| ||||||||||||||| Sbjct 883 ATCAAAAAGCGACGTCGCTATGAACG 858 >seq152177 Length=1299 Score = 84.2 bits (92), Expect = 4e-14 Identities = 49/51 (96%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 149 GACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAA 199 ||||||||||||||||||||| ||||||||||||||||||||| ||||||| Sbjct 981 GACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAA 1031 Score = 78.8 bits (86), Expect = 2e-12 Identities = 45/46 (98%), Gaps = 0/46 (0%) Strand=Plus/Plus Query 44 AAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 835 AAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT 880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 852824939232