Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq82682 105 1e-20 seq39950 98.7 2e-18 >seq82682 Length=3125 Score = 105 bits (116), Expect = 1e-20 Identities = 145/200 (73%), Gaps = 11/200 (6%) Strand=Plus/Plus Query 129 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCAT 188 |||||||||||||||| |||||| |||||||||||||| ||| || ||| | || || Sbjct 1978 TGATGCCCTTAGATGTCCTGGGCTGCACGCGCGCTACAATGAAAGTATCAATGTGT--AT 2035 Query 189 CACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCAT 248 ||| | ||| ||||| |||||| | | | ||| || ||||| | | | Sbjct 2036 TTCCTAGACCGAGAGGTCCGGGTAAA-TCGCTGAACCA-------CTTGGGATTGTGAAC 2087 Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308 || || | || | | | ||| ||||| || |||||| | | ||||| ||| ||| |||| Sbjct 2088 TGAAACTGTT-CACATGAACTTGGAATTCCCAGTAAGTGTGAGTCATTAGCTCGCATTGA 2146 Query 309 TTACGTCCCTGCCCTTTGTA 328 |||||||| ||||||||||| Sbjct 2147 TTACGTCCATGCCCTTTGTA 2166 >seq39950 Length=3493 Score = 98.7 bits (108), Expect = 2e-18 Identities = 88/108 (81%), Gaps = 3/108 (3%) Strand=Plus/Minus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| |||||||||||||||||||||||||||||| ||| || ||||||||||||| Sbjct 1450 AGATTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTCCTGAGCTGCACGCGCGCTAC 1392 Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAA 213 | ||| || ||||| || || ||| | ||| ||||| |||||| Sbjct 1391 AATGAAAGTTTCAACGTGT--ATTTCCTAGACCGAGAGGTCCGGGTAA 1346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 945453865216