Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq86840 107 6e-21 seq43503 91.5 5e-16 >seq86840 Length=6006 Score = 107 bits (118), Expect = 6e-21 Identities = 151/211 (72%), Gaps = 22/211 (10%) Strand=Plus/Minus Query 172 GTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG---- 227 ||||| ||| || ||||||| |||| ||||| ||||||||||| | | | | Sbjct 5225 GTTCCACTTAATCATGTAAGTAAGGAAACAATAAGAGTAGTGGTATTGGATTGGTGACGA 5166 Query 228 -----CCGAAA---CGG---CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGT 276 |||||| | | ||||||||||| ||||| |||| | || ||| | Sbjct 5165 AGGCCCCGAAAGACCAGTATCTCCCACTTATGCTACATCTCTTATGT------ACACTGC 5112 Query 277 CGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCC 336 | || || ||||||| ||||||| || || ||| || ||| ||| ||||||||||| Sbjct 5111 CAGATTAAAGTCAAGTTCAACAGAGTTTTTTTTTCC-GCTAATTATTTCAAGCCCGTTCT 5053 Query 337 CTTGGCTGTGGTTTCGCTAGATAGTAGATAG 367 ||||||||||||||||||| ||||||||||| Sbjct 5052 CTTGGCTGTGGTTTCGCTAAATAGTAGATAG 5022 >seq43503 Length=1854 Score = 91.5 bits (100), Expect = 5e-16 Identities = 62/70 (89%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 320 TCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAA 379 |||||||||||| ||| ||||||||||||||||| ||||| |||||||| | | | |||| Sbjct 671 TCCGCCAAGCCCATTCTCTTGGCTGTGGTTTCGCCAGATATTAGATAGGAATAATAGGAA 730 Query 380 TCTCGTTAAT 389 |||||||||| Sbjct 731 TCTCGTTAAT 740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1632185557856