Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neodiprion_20lecontei_20[refseq_20GCF_5F001263575.1_202015-08-10] 4,523 sequences; 239,677,193 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq429 80.6 1e-13 seq1528 75.2 5e-12 seq3453 71.6 6e-11 >seq429 Length=39415 Score = 80.6 bits (88), Expect = 1e-13 Identities = 58/67 (87%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| |||||| ||| |||| ||||||| ||||||| || |||||||| Sbjct 18493 GGAAAAGAAACTAACTAGGATTTCCTTAGTAGCGGCGAGCGAACAGGAAACAGCCCAGCA 18552 Query 61 CCGAATC 67 | ||||| Sbjct 18553 CTGAATC 18559 Score = 75.2 bits (82), Expect = 5e-12 Identities = 58/69 (84%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| |||||| ||| |||| |||| || ||||||| || |||||| | Sbjct 776 GGAAAAGAAACTAACTAGGATTTCCTTAGTAGCGGCAAGCGAACAGGAAACAGCCCATCA 717 Query 61 CCGAATCCC 69 | ||||||| Sbjct 716 CTGAATCCC 708 >seq1528 Length=7361 Score = 75.2 bits (82), Expect = 5e-12 Identities = 58/69 (84%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| |||||| ||| |||| |||| || ||||||| || |||||| | Sbjct 7186 GGAAAAGAAACTAACTAGGATTTCCTTAGTAGCGGCAAGCGAACAGGAAACAGCCCATCA 7127 Query 61 CCGAATCCC 69 | ||||||| Sbjct 7126 CTGAATCCC 7118 >seq3453 Length=1640 Score = 71.6 bits (78), Expect = 6e-11 Identities = 57/69 (83%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| |||||| | | ||| ||||||| ||||||| || |||||| | Sbjct 456 GGAAAAGAAACTAACTAGGATTTCTTTGGTAGCGGCGAGCGAACAGGAAACAGCCCATCA 515 Query 61 CCGAATCCC 69 | ||||||| Sbjct 516 CTGAATCCC 524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230390230320