Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neodiprion_20lecontei_20[refseq_20GCF_5F001263575.1_202015-08-10] 4,523 sequences; 239,677,193 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq429 208 1e-51 seq2755 194 3e-47 seq1719 190 3e-46 seq689 168 1e-39 seq362 152 8e-35 seq2942 114 2e-23 seq1536 109 9e-22 seq2660 91.5 2e-16 >seq429 Length=39415 Score = 208 bits (230), Expect = 1e-51 Identities = 219/292 (75%), Gaps = 47/292 (16%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9753 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 9694 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGC--------------- 116 | |||| || | |||| |||||| |||||||||||||| Sbjct 9693 C-TCAATCT-CGTGCGGCTAGAAGCCGCCTGTCCCTCTAAGAAGATTTATTTGTACGCCG 9636 Query 117 ----------CAGCC--ACCAA---------CC------ATAGTCGATGG---GGCTATT 146 | ||| ||| | || ||| || || | ||||| Sbjct 9635 GTAGTAAAAACCGCCCGACCGAGGCCGGGGGCCTTCGAGATACCGGAAGGTACGCCTATT 9576 Query 147 TAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAA 206 ||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 9575 TAGCAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTAA 9516 Query 207 GAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||||| |||||||||||||||| |||||||||| Sbjct 9515 GAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTCTCAATCTGTC 9464 Score = 208 bits (230), Expect = 1e-51 Identities = 219/292 (75%), Gaps = 47/292 (16%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 34847 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 34788 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGC--------------- 116 | |||| || | |||| |||||| |||||||||||||| Sbjct 34787 C-TCAATCT-CGTGCGGCTAGAAGCCGCCTGTCCCTCTAAGAAGATTTATTTGTACGCCG 34730 Query 117 ----------CAGCC--ACCAA---------CC------ATAGTCGATGG---GGCTATT 146 | ||| ||| | || ||| || || | ||||| Sbjct 34729 GTAGTAAAAACCGCCCGACCGAGGCCGGGGGCCTTCGAGATACCGGAAGGTACGCCTATT 34670 Query 147 TAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAA 206 ||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 34669 TAGCAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTAA 34610 Query 207 GAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||||| |||||||||||||||| |||||||||| Sbjct 34609 GAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTCTCAATCTGTC 34558 Score = 205 bits (226), Expect = 1e-50 Identities = 218/292 (75%), Gaps = 47/292 (16%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 14959 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 14900 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG-------------CCA 118 | |||| || | |||| |||||| |||||||||||||| || Sbjct 14899 C-TCAATCT-CGTGCGGCTAGAAGCCGCCTGTCCCTCTAAGAAGATTTATTTGTACGCCG 14842 Query 119 G---------CCACCA-ACC-------------------ATAGTCGATGG---GGCTATT 146 | || ||| ||| ||| || || | ||||| Sbjct 14841 GTAGTAAAATCCGCCAGACCGAGGCCGGGGGTCTTCGAGATACCGGAAGGTACGCCTATT 14782 Query 147 TAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAA 206 ||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 14781 TAGCAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTAA 14722 Query 207 GAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||||| ||||||||||| |||| | |||||||| Sbjct 14721 GAACGGCCATGCACCACCACCCACCGAATCAAGAAAAAGCTCTGAATCTGTC 14670 Score = 141 bits (156), Expect = 1e-31 Identities = 105/123 (85%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||||| |||||| || |||||||| |||||||||||||||||||| |||| ||||| || Sbjct 2761 CTATTCAGCAGGCTAGAGTCTCGTTTGTTATCGGAATTAACCAGACGAATCGCTCCATCA 2820 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTCCTC 261 |||||||||||||||||| |||||| || ||| ||| ||||||| |||||||||| | Sbjct 2821 ACTAAGAACGGCCATGCAGCACCACTCACCAAATTAAGTAAGAGCTCTCAATCTGTCATT 2880 Query 262 CCT 264 ||| Sbjct 2881 CCT 2883 Score = 89.7 bits (98), Expect = 8e-16 Identities = 60/66 (91%), Gaps = 1/66 (2%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| | ||||||||||||||||||||||||| ||||||||||| ||||||| |||||||| Sbjct 2588 TCCTTTAGTGTAGCGCGCGTGCGGCCCAGAATATCTAAGGGCACCACAGACATGTTATTG 2647 Query 72 CCTCAA 77 ||||| Sbjct 2648 -CTCAA 2652 >seq2755 Length=2649 Score = 194 bits (214), Expect = 3e-47 Identities = 214/292 (73%), Gaps = 47/292 (16%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 672 TCCTTCAGTGTAGCRCGCRTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 613 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGC--------------- 116 | |||| || | |||| |||||| ||||||||||| || Sbjct 612 C-TCAATCT-CGTGCGGCTAGAAGCCGCCTGTCCCTCTAAGGAGATTTATTTGTACTCCG 555 Query 117 ----------CAGCC--ACCAA---------CC------ATAGTCGATGG---GGCTATT 146 | ||| ||| | || ||| || || | ||||| Sbjct 554 GTAGTGAAAACCGCCCGACCGAGGCCGGGGGCCTTCGAGATACCGGAAGGTACGCCTATT 495 Query 147 TAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAA 206 ||||||| || ||||| ||||||||||||||| |||||||||||| ||||||||||||| Sbjct 494 TAGCAGGCTAGAGTCTCRTTCGTTATCGGAATTRACCAGACAAATCGCTCCACCAACTAA 435 Query 207 GAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||||| |||||||||||||||| |||||||||| Sbjct 434 GAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTCTCAATCTGTC 383 >seq1719 Length=8586 Score = 190 bits (210), Expect = 3e-46 Identities = 217/294 (74%), Gaps = 51/294 (17%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| | ||| ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 6870 TCCTTTAGTATAGCGCGCGTGCGGCCCGGAACATCTAAGGGCATCACAGACCTGTTATTG 6811 Query 72 CCTCAAACT--TCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG-------------C 116 | |||| || | || ||| |||||| |||||||||||||| | Sbjct 6810 C-TCAATCTCGTGCA---GCTAGAAGCCGCCTGTCCCTCTAAGAAGATTTATTTGTACGC 6755 Query 117 CAG--------------CCACCAA---------CCATAGT-----CG-ATGG---GGCTA 144 | | ||||| | || | | || | || | ||| Sbjct 6754 CGGTAGTGAAAACCGCCCCACCGAGGCCGGGGGCCTTCGAGATACCGCAAGGTACGCCTA 6695 Query 145 TTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACT 204 ||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 6694 TTTAGCAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACT 6635 Query 205 AAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct 6634 AAGAACGGCCATGCACCACCACCCACCRAATCAAGAAAGAGCTCTCAATCTGTC 6581 >seq689 Length=28852 Score = 168 bits (186), Expect = 1e-39 Identities = 210/292 (72%), Gaps = 47/292 (16%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct 19631 TCCTTCAGTGTAGCGCGCGTGCGGCCAAGAACATCTAAGGGCATCGCAGACCTGTTATTG 19690 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGC--------------- 116 |||| || | | || |||||| |||||||| ||| | Sbjct 19691 T-TCAATCT-CGTGCGACTAGAAGCCGCCTGTCCCTCTGAGAGGATTTATTTGTACGCCG 19748 Query 117 ----------CAGCC--ACCAA---------CC------ATAGTCGATGG---GGCTATT 146 | ||| ||| | || ||| || || | ||| | Sbjct 19749 GTAGTGAAAACCGCCCGACCGAGGCCGGAGACCTTCGAGATACCGGAAGGTACGCCTACT 19808 Query 147 TAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAA 206 |||||| || |||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 19809 CAGCAGGCTAGAGTCTCGTTCGTTATCGGAATCAACCAGACAAATCGCTCCACCAACTAA 19868 Query 207 GAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||||| |||||||||||||||| |||||||||| Sbjct 19869 GAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTCTCAATCTGTC 19920 >seq362 Length=31393 Score = 152 bits (168), Expect = 8e-35 Identities = 206/293 (70%), Gaps = 48/293 (16%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct 15389 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTGAGGGCATGACAGACCTGTTATTG 15448 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGC--------------- 116 || ||| || | |||| |||||| || ||||| ||||| Sbjct 15449 CC-CAATCT-CGTGCGGCTAGAAGCCGGCGGTTCCTCTGAGAAGATTCATTTGTACGCCG 15506 Query 117 -----------CAGCC--ACCAA---------CCATA---------GTCGATGGGGCTAT 145 | ||| ||| | || || | ||| | |||| Sbjct 15507 GTGATAAAAAACCGCCCGACCGAGGCCGGGGGCCTTAAAAATACCGGAAGATACGCCTAT 15566 Query 146 TTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTA 205 | | |||| || ||||||||||| |||||||||||||||||||||| || ||||||||| Sbjct 15567 TCATCAGGCTAGAGTCTCGTTCGTCATCGGAATTAACCAGACAAATCGCTTCACCAACTA 15626 Query 206 AGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||| |||||||||||||||| ||||||| |||||||| |||||||| Sbjct 15627 AGAACGGTCATGCACCACCACCCACCGAATCAAAAAAGAGCTCCTAATCTGTC 15679 >seq2942 Length=2297 Score = 114 bits (126), Expect = 2e-23 Identities = 88/104 (85%), Gaps = 2/104 (2%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| |||||| || ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 2162 TCCTTCAGTGYAGYGCGCGYGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 2221 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 ||||| ||| |||| |||||| |||||||||||||| Sbjct 2222 -CTCAATCTT-GTGCGGCTAGAAGCCGCCTGTCCCTCTAAGAAG 2263 >seq1536 Length=12692 Score = 109 bits (120), Expect = 9e-22 Identities = 95/118 (81%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||||| |||||| || ||||||| ||| | ||| | ||||| |||||| ||||||| Sbjct 11988 CTATTCAGCAGGCTAGAGTCTCGTCAGTTGGCAAAATCATCCAGAAAAATCAATCCACCA 11929 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTCC 259 ||||||||||||||||||||| |||| ||||||| | | |||| ||||||||||| Sbjct 11928 GGTAAGAACGGCCATGCACCACCGCCCACCGAATCAAAAGAAAGCTCTCAATCTGTCC 11871 Score = 86.0 bits (94), Expect = 1e-14 Identities = 82/104 (79%), Gaps = 3/104 (3%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||| ||||||||| |||||||||||| ||||||||||||| ||||||||| Sbjct 12160 TCCTTCAGTGTAGTGCGCGTGCGTCCCAGAACATCTGAGGGCATCACAGATCTGTTATTG 12101 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 | ||| || | | | | |||||| ||||| |||||| Sbjct 12100 -CGCAATCT--CGTGCGGTAGAAGCCGCCTKTCCCTTYAAGAAG 12060 >seq2660 Length=2805 Score = 91.5 bits (100), Expect = 2e-16 Identities = 91/118 (77%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 || || |||| | || ||||||| ||| | ||| | ||||| ||||| ||||||| Sbjct 1498 CTGTTCAGCAAGCTAGAGTCTCGTCAGTTGGCAAAATCATCCAGAAAAATCGATCCACCA 1439 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTCC 259 ||||||||||||||||||||| |||| ||||||| | | |||| |||||||| || Sbjct 1438 GGTAAGAACGGCCATGCACCACCGCCCACCGAATCAAAAGAAAGCTCTCAATCTGACC 1381 Score = 86.0 bits (94), Expect = 1e-14 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| || |||||| ||||||||| |||||||||||| ||||||||||||| ||||||||| Sbjct 1670 TCCTTCMGTGTAGTGCGCGTGCGTCCCAGAACATCTGAGGGCATCACAGATCTGTTATTG 1611 Query 72 C 72 | Sbjct 1610 C 1610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796765086963