Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neodiprion_20lecontei_20[refseq_20GCF_5F001263575.1_202015-08-10] 4,523 sequences; 239,677,193 total letters Query= NC_033778.1 Length=111453 Score E Sequences producing significant alignments: (Bits) Value seq1968 84.2 2e-11 >seq1968 Length=259245 Score = 84.2 bits (92), Expect = 2e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 26371 GATGATGGTAGAATATGTAAAATTTGTTATAATGAAGAAATCGGTGTTGTATTTTTACCG 26430 ||||| || || | || |||||||| || | |||||| | || |||||||||||||| Sbjct 96541 GATGACGGAAGGCTTTGCAAAATTTGCTACACGGAAGAACTGGGAGTTGTATTTTTACCT 96600 Query 26431 TGTGGTCATATTGTAGCATGTATTAAATGTGCACCCGGAATGATGAATTGTCCAGTCTGT 26490 ||||| || || ||||| ||| | || || || || | ||| | |||| |||| || Sbjct 96601 TGTGGGCACATGGTAGCCTGTGTCAAGTGCGCGCCAAGTTTGACAACTTGTGCAGTATGC 96660 Query 26491 CGTAAACCAGTCAGCATGAATATACGAACATTCTTTTCATA 26531 || ||||| ||| |||| | | || | | | ||||||| Sbjct 96661 CGGAAACCTTTCACAATGACTGTGCGGGCTTACATTTCATA 96701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356505146904642