Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20]
180,236 sequences; 2,439,301,466 total letters
Query= AAMG01000026.1
Length=199
Score E
Sequences producing significant alignments: (Bits) Value
seq1223 141 1e-31
seq4656 116 4e-24
seq178522 84.2 2e-14
>seq1223
Length=197574
Score = 141 bits (156), Expect = 1e-31
Identities = 151/198 (76%), Gaps = 1/198 (1%)
Strand=Plus/Minus
Query 1 GCAGTCTTTAGATGAATGGCTGCTTCCAGGCCAACATCCTAACTGTCTTATCAATCAGAC 60
||| |||||| ||||||||||||||||| |||||||||||| ||||| |||||| ||
Sbjct 3479 GCACTCTTTAAATGAATGGCTGCTTCCAAGCCAACATCCTAGCTGTCGGGGCAATCAAAC 3420
Query 61 TTCGTTAGATTGACTTATCTGACATTTCTGGGGCATATCTGAGAGTCCGGATTCTTCTCC 120
|||| | ||||| | |||||| || | || |||| ||| || ||||| ||
Sbjct 3419 CGCGTTTTTTCAACTTAGCATACATTTGGGGACCTTAGCTGATGGTCTGGGTTCTTTCCC 3360
Query 121 TCTCGGGCACGGACCTTACCACCCATGCCCTCACTCGCGCGGCATGACTGATGCGCATTC 180
|||||| || |||||||| |||||||||||||||| || || | | || ||||||
Sbjct 3359 TCTCGGACATGGACCTTAGCACCCATGCCCTCACT-GCTGTAAATCATTTATTAGCATTC 3301
Query 181 GGAGTTTGGCAGGACTTG 198
|||||||| ||||| |||
Sbjct 3300 GGAGTTTGTCAGGAATTG 3283
>seq4656
Length=104629
Score = 116 bits (128), Expect = 4e-24
Identities = 146/198 (74%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 1 GCAGTCTTTAGATGAATGGCTGCTTCCAGGCCAACATCCTAACTGTCTTATCAATCAGAC 60
||| |||||| ||||||||||||||||| |||||||||||| |||||| ||| | |||
Sbjct 92335 GCACTCTTTAAATGAATGGCTGCTTCCAAGCCAACATCCTAGCTGTCTGGGCAACCGGAC 92394
Query 61 TTCGTTAGATTGACTTATCTGACATTTCTGGGGCATATCTGAGAGTCCGGATTCTTCTCC 120
||||||| | ||||| |||| || | || |||| ||| || ||||| ||
Sbjct 92395 CTCGTTAGTTCAACTTAGAACGGATTTGGGGACCTTAGCTGATGGTCTGGGTTCTTTCCC 92454
Query 121 TCTCGGGCACGGACCTTACCACCCATGCCCTCACTCGCGCGGCATGACTGATGCGCATTC 180
|||||| | |||||||| |||||| ||||||| || | ||| || | ||||||
Sbjct 92455 TCTCGGCCTTGGACCTTAGCACCCAAAGCCTCACT-GCCGGCCATATCT-AGCAGCATTC 92512
Query 181 GGAGTTTGGCAGGACTTG 198
|||||| | | ||| |||
Sbjct 92513 GGAGTTCGTCTGGATTTG 92530
>seq178522
Length=1007
Score = 84.2 bits (92), Expect = 2e-14
Identities = 139/198 (70%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 1 GCAGTCTTTAGATGAATGGCTGCTTCCAGGCCAACATCCTAACTGTCTTATCAATCAGAC 60
||| |||||| | |||| |||||||||| || ||| |||| |||||| ||| |||
Sbjct 489 GCACTCTTTAAAGGAATAGCTGCTTCCAAGCTAACCTCCTGGCTGTCTCTGCAACTGGAC 548
Query 61 TTCGTTAGATTGACTTATCTGACATTTCTGGGGCATATCTGAGAGTCCGGATTCTTCTCC 120
| || | | ||||| | | |||| || | || | || ||| || ||||| ||
Sbjct 549 CACCTTTGTTCAACTTAACCTAGATTTGGGGACCTTAGCGGAAGGTCTGGGTTCTTTCCC 608
Query 121 TCTCGGGCACGGACCTTACCACCCATGCCCTCACTCGCGCGGCATGACTGATGCGCATTC 180
|||||| | |||||||| ||||| ||||||||| || | || || | ||||||
Sbjct 609 TCTCGGACTGGGACCTTAGCACCCCAGCCCTCACTGCCGGTTC-TGTATGGCG-GCATTC 666
Query 181 GGAGTTTGGCAGGACTTG 198
|||||| | ||||| |||
Sbjct 667 GGAGTTCGTCAGGATTTG 684
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 536661330912
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |