Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= AAMG01000026.1 Length=199 Score E Sequences producing significant alignments: (Bits) Value seq1223 141 1e-31 seq4656 116 4e-24 seq178522 84.2 2e-14 >seq1223 Length=197574 Score = 141 bits (156), Expect = 1e-31 Identities = 151/198 (76%), Gaps = 1/198 (1%) Strand=Plus/Minus Query 1 GCAGTCTTTAGATGAATGGCTGCTTCCAGGCCAACATCCTAACTGTCTTATCAATCAGAC 60 ||| |||||| ||||||||||||||||| |||||||||||| ||||| |||||| || Sbjct 3479 GCACTCTTTAAATGAATGGCTGCTTCCAAGCCAACATCCTAGCTGTCGGGGCAATCAAAC 3420 Query 61 TTCGTTAGATTGACTTATCTGACATTTCTGGGGCATATCTGAGAGTCCGGATTCTTCTCC 120 |||| | ||||| | |||||| || | || |||| ||| || ||||| || Sbjct 3419 CGCGTTTTTTCAACTTAGCATACATTTGGGGACCTTAGCTGATGGTCTGGGTTCTTTCCC 3360 Query 121 TCTCGGGCACGGACCTTACCACCCATGCCCTCACTCGCGCGGCATGACTGATGCGCATTC 180 |||||| || |||||||| |||||||||||||||| || || | | || |||||| Sbjct 3359 TCTCGGACATGGACCTTAGCACCCATGCCCTCACT-GCTGTAAATCATTTATTAGCATTC 3301 Query 181 GGAGTTTGGCAGGACTTG 198 |||||||| ||||| ||| Sbjct 3300 GGAGTTTGTCAGGAATTG 3283 >seq4656 Length=104629 Score = 116 bits (128), Expect = 4e-24 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 1 GCAGTCTTTAGATGAATGGCTGCTTCCAGGCCAACATCCTAACTGTCTTATCAATCAGAC 60 ||| |||||| ||||||||||||||||| |||||||||||| |||||| ||| | ||| Sbjct 92335 GCACTCTTTAAATGAATGGCTGCTTCCAAGCCAACATCCTAGCTGTCTGGGCAACCGGAC 92394 Query 61 TTCGTTAGATTGACTTATCTGACATTTCTGGGGCATATCTGAGAGTCCGGATTCTTCTCC 120 ||||||| | ||||| |||| || | || |||| ||| || ||||| || Sbjct 92395 CTCGTTAGTTCAACTTAGAACGGATTTGGGGACCTTAGCTGATGGTCTGGGTTCTTTCCC 92454 Query 121 TCTCGGGCACGGACCTTACCACCCATGCCCTCACTCGCGCGGCATGACTGATGCGCATTC 180 |||||| | |||||||| |||||| ||||||| || | ||| || | |||||| Sbjct 92455 TCTCGGCCTTGGACCTTAGCACCCAAAGCCTCACT-GCCGGCCATATCT-AGCAGCATTC 92512 Query 181 GGAGTTTGGCAGGACTTG 198 |||||| | | ||| ||| Sbjct 92513 GGAGTTCGTCTGGATTTG 92530 >seq178522 Length=1007 Score = 84.2 bits (92), Expect = 2e-14 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 1 GCAGTCTTTAGATGAATGGCTGCTTCCAGGCCAACATCCTAACTGTCTTATCAATCAGAC 60 ||| |||||| | |||| |||||||||| || ||| |||| |||||| ||| ||| Sbjct 489 GCACTCTTTAAAGGAATAGCTGCTTCCAAGCTAACCTCCTGGCTGTCTCTGCAACTGGAC 548 Query 61 TTCGTTAGATTGACTTATCTGACATTTCTGGGGCATATCTGAGAGTCCGGATTCTTCTCC 120 | || | | ||||| | | |||| || | || | || ||| || ||||| || Sbjct 549 CACCTTTGTTCAACTTAACCTAGATTTGGGGACCTTAGCGGAAGGTCTGGGTTCTTTCCC 608 Query 121 TCTCGGGCACGGACCTTACCACCCATGCCCTCACTCGCGCGGCATGACTGATGCGCATTC 180 |||||| | |||||||| ||||| ||||||||| || | || || | |||||| Sbjct 609 TCTCGGACTGGGACCTTAGCACCCCAGCCCTCACTGCCGGTTC-TGTATGGCG-GCATTC 666 Query 181 GGAGTTTGGCAGGACTTG 198 |||||| | ||||| ||| Sbjct 667 GGAGTTCGTCAGGATTTG 684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 536661330912