Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20]
180,236 sequences; 2,439,301,466 total letters
Query= AAMG01000056.1
Length=332
Score E
Sequences producing significant alignments: (Bits) Value
seq178522 109 1e-21
seq1223 78.8 2e-12
>seq178522
Length=1007
Score = 109 bits (120), Expect = 1e-21
Identities = 196/281 (70%), Gaps = 4/281 (1%)
Strand=Plus/Plus
Query 50 CACTATTGGATTGTCCCGAAGGACGTTCCATACTGTCAATCTCGACTCTTTCCGTGGATT 109
|||||| |||||||| |||| ||| || |||||||| ||| || ||| | |||
Sbjct 33 CACTATCCGATTGTCC-GAAG-ACGCTCGGTACTGTCAGCTTCGGCTAAGCCCGCGCATT 90
Query 110 TGCCTGCGGAAATCAACGTCTACACTCTTTAACCGGCTATTCCGTCAGCCGGCGGCGTTG 169
|| || ||| ||| |||| |||||||| | |||||||||| | ||||| |
Sbjct 91 TGACTACGGGCC-CAATACCTACTGCCTTTAACCCGGTATTCCGTCACCGGGCGGATCTT 149
Query 170 TCACTCCTGCGTCCCCACGTCACCCTCAAATGTAGTAACGGAATACTAACCGTTTCTGCC 229
||| || |||| | | | || || | ||| |||||| ||||| || | ||
Sbjct 150 TCATCACTCCGTCACTCCATTGCCTGCATGGATGGTATGGGAATATTAACCCATTGT-CC 208
Query 230 ATCGGTCTCGCCGTTCGGCTGAACCTTATGACCCGACTTACCCTGATCCGATTAGCGGTG 289
|||| | || |||| | ||||| | ||||||| ||||||||||||||| || ||
Sbjct 209 ATCGACTACCCCTCTCGGGTTCGCCTTAGGCCCCGACTAACCCTGATCCGATTAACGTTG 268
Query 290 ATCAGGAAACCTTAGTCTTTCGGCGAGGGGGTTTCCCACCC 330
|||||||||||| ||||| ||| | | ||||||| | |||
Sbjct 269 ATCAGGAAACCTGGGTCTTACGGTGGGCGGGTTTCTCGCCC 309
>seq1223
Length=197574
Score = 78.8 bits (86), Expect = 2e-12
Identities = 138/199 (69%), Gaps = 9/199 (5%)
Strand=Plus/Minus
Query 136 CTTTAACCGGCTATTCCGTCAGCCGGCGGCGTTGTCACTCCTGCGTCCCCACGTCACCCT 195
||||||| |||||||||||| |||| | |||| ||||||| | | |||
Sbjct 3853 CTTTAACGAACTATTCCGTCAGTTCGCGGTACTTTCACCACTGCGTCACTCCATCA---- 3798
Query 196 CAAATGT----AGTAACGGAATACTAACCGTTTCTGCCATCGGTCTCGCCGTTCGGCTGA 251
||| | | |||| |||||| ||||| || ||||||| || || ||||| ||
Sbjct 3797 CAACTATTACAAGTACGGGAATATTAACCCGTT-GGCCATCGACGTCCCCCTTCGGGTGT 3739
Query 252 ACCTTATGACCCGACTTACCCTGATCCGATTAGCGGTGATCAGGAAACCTTAGTCTTTCG 311
||||| | ||||||| |||| | | ||||||| | | ||||||||| ||||| ||
Sbjct 3738 GCCTTAGGTCCCGACTAACCCGCAGCTGATTAGCATAGCTGCGGAAACCTTGGTCTTACG 3679
Query 312 GCGAGGGGGTTTCCCACCC 330
| | | ||||||| | |||
Sbjct 3678 GTGTGCGGGTTTCTCGCCC 3660
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 958269734400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |