Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq4656 369 7e-100 seq178522 201 2e-49 seq44255 199 8e-49 seq1223 188 1e-45 seq66101 161 2e-37 seq52678 156 8e-36 seq4984 132 9e-29 >seq4656 Length=104629 Score = 369 bits (408), Expect = 7e-100 Identities = 283/333 (85%), Gaps = 2/333 (1%) Strand=Plus/Minus Query 4 CCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAG 63 ||||| |||||| |||||| ||| |||||| ||| | || |||||||||||||||| ||| Sbjct 92948 CCCGAACAGGGGAGTGAAA-AGAACCTGAAACCGTGTGCTTACAAGCGGTCGGAGCGGAG 92890 Query 64 TGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAG 123 ||||| |||||||||||||||||||||||||||||||||||||| || | || || || Sbjct 92889 CGATTCCGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTACTCTTGTCCGGCAAG 92830 Query 124 GTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTG 183 ||||| | || || | | |||||||| ||||||||| || ||||||||| ||| | Sbjct 92829 GTTAATCGATTAAGTCGAGG-AGCCGAAGCGAAAGCGAGTCTGAACAGGGCGCACAGTCG 92771 Query 184 GTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGC 243 | | | |||||||||||||||||||||||||| | ||||||||||| |||||||| | Sbjct 92770 GATGAGGTAGACGCGAAACCTTGTGATCTACCCTTGGGCAGGTTGAAGGTGCGGTAACAC 92711 Query 244 GTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGT 303 || ||||||||||||||| ||||||||||||||||| |||||||| | |||||||||| Sbjct 92710 GTACTGGAGGACCGAACCGATAAACGTTGAAAAGTTTCCGGATGACCTGAGGGTAGGGGT 92651 Query 304 GAAAGGCCAATCAAACTGGGAAATAGCTCGTAC 336 ||||||||||||||||||||||||||||||||| Sbjct 92650 GAAAGGCCAATCAAACTGGGAAATAGCTCGTAC 92618 >seq178522 Length=1007 Score = 201 bits (222), Expect = 2e-49 Identities = 191/240 (80%), Gaps = 3/240 (1%) Strand=Plus/Minus Query 98 CCTACGAGTTAGTCGTCACCAGCGAGGTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAA 157 ||||||||||| || || || || ||| ||||| ||||| ||| | ||| || |||| Sbjct 1007 CCTACGAGTTACTCCTCTCCGGCAAGGGTAAGGCATTCAGTGCCGC-ACCCGGAGCGAAA 949 Query 158 GCGAGCCTTAACAGGGCGAC-GAGTTGGTGGCGCTAGACGCGAAACCTTGTGATCTACCC 216 ||||| || || |||||| | |||| || || | |||||||||||| | ||||||||||| Sbjct 948 GCGAGTCTGAA-AGGGCGGCCGAGTCGGAGGGGGTAGACGCGAAACTTAGTGATCTACCC 890 Query 217 ACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGGAGGACCGAACCGGTAAACGTTGAAAA 276 | | |||||||||| ||||| | ||||||||||||||| ||| ||||||||| Sbjct 889 ATGGCCAGGTTGAAGGTTGGGTAAAACCAACTGGAGGACCGAACCGATAAGCGTTGAAAA 830 Query 277 GTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCCAATCAAACTGGGAAATAGCTCGTAC 336 | || ||||||| | ||||||||||||||||| |||||||||| |||||||||||||| Sbjct 829 GCTTCCGGATGAGCTGTGGGTAGGGGTGAAAGGCTAATCAAACTGAGAAATAGCTCGTAC 770 >seq44255 Length=9396 Score = 199 bits (220), Expect = 8e-49 Identities = 245/331 (74%), Gaps = 8/331 (2%) Strand=Plus/Minus Query 4 CCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAG 63 ||||| ||||| |||||| ||| |||||| ||| |||||||| | || |||||| Sbjct 7321 CCCGACAAGGGGAGTGAAAGAGAACCTGAAACCGGATGCCTACAAACAGTGGGAGCCC-- 7264 Query 64 TGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAG 123 || |||||| |||| ||||||| |||||| | | ||| |||||| | | ||| || Sbjct 7263 -GAAAGGGTGACCGCGTACCTTTTGTATAATGGGTCAGCGACTTAGTC-TGGCGAGCAAG 7206 Query 124 GTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTG 183 ||||| | ||| || || || ||||||||| || ||||||||| |||| Sbjct 7205 CTTAAGCCGAT-AGGTGG---AGGCGTAGCGAAAGCGAGTCTGAACAGGGCGTTCAGTTC 7150 Query 184 GTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGC 243 || | ||||| ||||||| |||||||| ||| ||||||||||||| || ||||| Sbjct 7149 GTCGGATTAGACCCGAAACCGAGTGATCTAGCCATGAGCAGGTTGAAGGTGCAGTAACAT 7090 Query 244 GTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGT 303 | |||||||||||||| | | |||| || || |||||||| | || ||||||| Sbjct 7089 GCACTGGAGGACCGAACCCGCATCTGTTGCAATAGATTGGGATGACTTGTGGCTAGGGGT 7030 Query 304 GAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 ||||||||||||||||| |||||||||| || Sbjct 7029 GAAAGGCCAATCAAACTCGGAAATAGCTGGT 6999 >seq1223 Length=197574 Score = 188 bits (208), Expect = 1e-45 Identities = 147/174 (84%), Gaps = 1/174 (1%) Strand=Plus/Plus Query 164 CTTAACAGGGCGACG-AGTTGGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGC 222 ||||| |||||| | ||| || | ||||||||||||| ||||||||||||| | || Sbjct 3025 CTTAATAGGGCGCTGCAGTCAGTAATGGTAGACGCGAAACCGTGTGATCTACCCATGGGC 3084 Query 223 AGGTTGAAGTCGCGGTAACGCGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTC 282 |||||||||| |||||| | |||||||||||||||||| |||||||||||| ||| Sbjct 3085 AGGTTGAAGTTTGGGTAACACCAAATGGAGGACCGAACCGGTTGACGTTGAAAAGTCTTC 3144 Query 283 GGATGACTCGCGGGTAGGGGTGAAAGGCCAATCAAACTGGGAAATAGCTCGTAC 336 ||||||| | ||||||||||||||||||||||||||| ||||||||||||||| Sbjct 3145 GGATGACCTGTGGGTAGGGGTGAAAGGCCAATCAAACTCGGAAATAGCTCGTAC 3198 >seq66101 Length=5264 Score = 161 bits (178), Expect = 2e-37 Identities = 231/324 (71%), Gaps = 6/324 (2%) Strand=Plus/Minus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70 ||||| |||||||||| |||||| |||| || ||||||| || ||||| | | Sbjct 2490 AGGGGAGTGAAATAGATCCTGAAACCGCATGCATACAAGCAGTGGGAGCACCTTTGTGGT 2431 Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130 ||||| |||| ||||||| |||||| | | ||| ||| ||| ||| ||||||| Sbjct 2430 GTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTACAT-TCAGTAGCAAGGTTAACC 2372 Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGC 190 | | || ||||| || |||| |||| | || |||||| | ||| | ||| Sbjct 2371 GAATAGGGG-----AGCCGTAGAGAAATCGAGTCCGAATAGGGCGTCCAGTCGCTGGGTG 2317 Query 191 TAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGG 250 ||||| ||||||| |||||||| ||| | |||| ||||| || ||||| || ||| Sbjct 2316 TAGACCCGAAACCAAGTGATCTATCCATGGCCAGGATGAAGGTGCCGTAACAGGTACTGG 2257 Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310 ||| ||||||| || |||| ||| || |||||| | || |||||||||||||| Sbjct 2256 AGGTCCGAACCCACTAATGTTGCAAAATTAGGGGATGAGCTGTGGATAGGGGTGAAAGGC 2197 Query 311 CAATCAAACTGGGAAATAGCTCGT 334 || |||||| |||||||||| || Sbjct 2196 TAAACAAACTTGGAAATAGCTGGT 2173 Score = 156 bits (172), Expect = 8e-36 Identities = 231/325 (71%), Gaps = 7/325 (2%) Strand=Plus/Minus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70 ||||| |||||||||| |||||| |||| || ||||||| || ||||| | | Sbjct 514 AGGGGAGTGAAATAGATCCTGAAACCGCATGCATACAAGCAGTGGGAGCACCTTTGTGGT 455 Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130 ||||| |||| ||||||| |||||| | | ||| ||| ||| || ||||||| Sbjct 454 GTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTACAT-TCAGTGGCAAGGTTAACC 396 Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACG-AGTTGGTGGCG 189 | | || ||||| || ||||||||| | || ||||||| ||| | ||| Sbjct 395 GAATAGGGA-----AGCCGTAGCGAAAGCGAGTCCGAATAGGGCGAATTAGTCGCTGGGT 341 Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATG 249 ||||| ||||||| ||||||| ||| | |||||||||| |||||| | || Sbjct 340 GTAGACCCGAAACCAGATGATCTATCCATGGCCAGGTTGAAGGTTGGGTAACACCAACTG 281 Query 250 GAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGG 309 |||||||||||| |||||||||||||| |||||| | || ||||||||||||| Sbjct 280 GAGGACCGAACCCACTAACGTTGAAAAGTTAGGGGATGAGCTGTGGATAGGGGTGAAAGG 221 Query 310 CCAATCAAACTGGGAAATAGCTCGT 334 | || |||| |||||||||| || Sbjct 220 CTAAACAAATCTGGAAATAGCTGGT 196 >seq52678 Length=7260 Score = 156 bits (172), Expect = 8e-36 Identities = 240/337 (71%), Gaps = 8/337 (2%) Strand=Plus/Minus Query 1 TAGCCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCC 60 || |||| | ||||| ||||||||| |||||| ||| || ||||| | |||||||| Sbjct 595 TACCCCGGG-AGGGGAGTGAAATAGTACCTGAAACCGTTTGCTTACAAACCGTCGGAGCA 537 Query 61 GAGTGATTCG--GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCA 118 | | | |||||||||||||||||| | ||||||||| |||||||| | Sbjct 536 GCCCTAGCAGCTGTGACGGCGTGCCTTTTGAAGAATGAGCCTGCGAGTTAGCGATATGTG 477 Query 119 GCGAGGTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACG 178 |||||||||| | | || | |||||| || ||||||||| || || ||||||| Sbjct 476 GCGAGGTTAACC-CGTGTGG---GGTAGCCGTAGCGAAAGCGAGTCTGAATAGGGCGATT 421 Query 179 -AGTTGGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGG 237 ||| | | |||||| |||| | |||||||| ||| | |||||||||| || Sbjct 420 CAGTCGCATGTCCTAGACCCGAAGCGAAGTGATCTATCCATGGCCAGGTTGAAGCGAGGG 361 Query 238 TAACGCGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGT 297 ||| | | |||||||||||||| | |||||||| | |||||| | || | Sbjct 360 TAAGACCTCGTGGAGGACCGAACCCACTTAGGTTGAAAACTGAGGGGATGAGCTGTGGAT 301 Query 298 AGGGGTGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 ||||||||||||||||||||||| | |||||| || Sbjct 300 AGGGGTGAAAGGCCAATCAAACTTCGTGATAGCTGGT 264 >seq4984 Length=100180 Score = 132 bits (146), Expect = 9e-29 Identities = 191/265 (72%), Gaps = 6/265 (2%) Strand=Plus/Minus Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130 ||||| |||| |||||||||||||| | | ||||||| || | ||| || ||||| Sbjct 69424 GTGACAGCGTACCTTTTGCATAATGGGTCAGCGAGTTAATC-TATGAAGCAAGCTTAAGC 69366 Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACG-AGTTGGTGGCG 189 || ||| ||| || || |||||| || || || |||||| |||| | Sbjct 69365 CGTT-AGGTG---TAGGCGTAGCGAAAGCAAGTCTGAATAGGGCGTTTTAGTTTTATGGA 69310 Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATG 249 ||||| ||||||| |||||||| || || ||| |||||| | ||||| | || Sbjct 69309 TTAGACCCGAAACCAAGTGATCTAGTCATGACCAGATTGAAGGTGTGGTAAAACACACTG 69250 Query 250 GAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGG 309 ||||| |||||| || || |||| || || | |||||| | | | ||||||||||||| Sbjct 69249 GAGGATCGAACCAGTTAATGTTGCAACATTATTGGATGAGTTGTGATTAGGGGTGAAAGG 69190 Query 310 CCAATCAAACTGGGAAATAGCTCGT 334 ||||||||||| |||||||||| || Sbjct 69189 CCAATCAAACTTGGAAATAGCTGGT 69165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 971046664192