Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq1079 105 1e-20 seq50242 91.5 2e-16 seq148226 75.2 2e-11 >seq1079 Length=207171 Score = 105 bits (116), Expect = 1e-20 Identities = 157/215 (73%), Gaps = 7/215 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||| ||| ||||| | |||| || ||||||||||| ||||||||| ||| Sbjct 183093 GTACAAAGGGCAGTGACTTAGTCGGCACGAG-TTAATGACTCGCGCCTACTAGGAA-TTC 183036 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCAC-GA-TGAAATTTCAAAGAT 118 ||||||| || ||||||| |||| |||||| ||| || | | | | | | Sbjct 183035 CTCGTTGGAGGGGAACAATTACAATCCCAGGTCCCCAGCACTGAGACAGACTGCTCTGGT 182976 Query 119 TACCCGGACCTGTCGGCCAAGG-TGATAGA--CTCGTTGAATACATCAGTGTAGCGCGCG 175 |||| | || |||||||| | ||| | ||||| | | |||||||| || Sbjct 182975 TACCTAGGCCGACAGGCCAAGGAACAAAGAAGCACGTTGTCCGCTCTACTGTAGCGCACG 182916 Query 176 TGCGGCCCAGAACATCTAAGGGCATCACAGACCTG 210 |||||||| | |||||| ||||||||||||||||| Sbjct 182915 TGCGGCCCCGGACATCTTAGGGCATCACAGACCTG 182881 >seq50242 Length=7886 Score = 91.5 bits (100), Expect = 2e-16 Identities = 50/50 (100%), Gaps = 0/50 (0%) Strand=Plus/Minus Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 185 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 136 >seq148226 Length=1180 Score = 75.2 bits (82), Expect = 2e-11 Identities = 60/70 (86%), Gaps = 2/70 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||| ||| ||||| | |||| || ||||||||||| ||||||||| ||| Sbjct 75 GTACAAAGGGCAGTGACTTAGTCGGCACGAG-TTAATGACTCGCGCCTACTAGGAA-TTC 18 Query 61 CTCGTTGAAG 70 ||||||| || Sbjct 17 CTCGTTGGAG 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 750686980740