Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq180232 352 5e-95 seq180235 307 2e-81 seq79288 275 1e-71 seq180226 259 9e-67 >seq180232 Length=366 Score = 352 bits (390), Expect = 5e-95 Identities = 255/291 (88%), Gaps = 3/291 (1%) Strand=Plus/Minus Query 7 GTCCGGCCGGGCCTTTCCTTCTGGG-GATCCG-CATGCCCTTCACTGGGTGTGCCGGGGA 64 ||| ||||||| ||| |||||| || || | | ||||| ||| |||||||||| | |||| Sbjct 290 GTCTGGCCGGGTCTT-CCTTCTTGGTGAACTGGCATGCTCTTTACTGGGTGTGTCAGGGA 232 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 ||| ||||||||||||||||||||||||||| ||||||||||| ||||| |||||| || Sbjct 231 ACCAAGACTTTTACTTTGAAAAAATTAGAGTGCTCAAAGCAGGCATTTGCCCGAATATAT 172 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 ||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||| Sbjct 171 TAGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAATCGCCGT 112 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 ||||||||||||||| ||| ||||| | |||||||| || ||||||||||||||||| Sbjct 111 AATGATTAATAGGGACAGTTGGGGGCATTAGTATTCACATGCTAGAGGTGAAATTCTTGG 52 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATT 295 |||| |||||||||||| |||||||||| || ||||||||||||||||| Sbjct 51 ATTTTGTGAAGACTAACTTCTGCGAAAGCATTTGCCAAGGATGTTTTCATT 1 >seq180235 Length=224 Score = 307 bits (340), Expect = 2e-81 Identities = 204/224 (91%), Gaps = 2/224 (1%) Strand=Plus/Minus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGA 133 ||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||| Sbjct 224 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCCCGAATATATTAGCATGGA 165 Query 134 ATAATAGAATAGGACGT-GCGGTTCTATTTTGTTGGTTTCTAGGA-CCGCCGTAATGATT 191 ||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||| Sbjct 164 ATAATAGAATAGGACGTTGCGGTCCTATTTTGTTGGTTTCTAGGATCCGCCGTAATGATT 105 Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 |||||||||||||||||| | ||||||| || ||||||||||||||||||||| | Sbjct 104 AATAGGGATAGTCGGGGGCATTCGTATTCACATGCTAGAGGTGAAATTCTTGGATTTTGT 45 Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATT 295 |||||| ||||||||||||||| || ||||||||||||||||| Sbjct 44 GAAGACGAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATT 1 >seq79288 Length=336 Score = 275 bits (304), Expect = 1e-71 Identities = 206/238 (87%), Gaps = 4/238 (2%) Strand=Plus/Plus Query 62 GGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTT--TGCTCGA 118 ||| ||| || || |||| ||||||||||||||||||||||||||||| | ||| || Sbjct 99 GGAACCATGAACTGTTACCTTGAAAAAATTAGAGTGTTCAAAGCAGGCTATGATGCCGGA 158 Query 119 ATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGA- 177 |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct 159 ATACATTAGCATGGAATAATGAAATAGGACGTGCGGACCTATTTTGTTGGTTTCTAGGAG 218 Query 178 CCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAA 237 ||||||||||||||||||||||||| |||||| | ||||||||| | || ||||||| Sbjct 219 CCGCCGTAATGATTAATAGGGATAGCCGGGGGCATTTGTATTCAATGGCAAGGGGTGAAA 278 Query 238 TTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATT 295 | |||||||| ||||||||| |||| |||||||||| || ||||||||||||||||| Sbjct 279 TCCTTGGATTCATTGAAGACAAACTTCTGCGAAAGCATTTGCCAAGGATGTTTTCATT 336 >seq180226 Length=541 Score = 259 bits (286), Expect = 9e-67 Identities = 210/250 (84%), Gaps = 12/250 (5%) Strand=Plus/Plus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC---GAATACATTAGCAT 130 |||||| ||| ||| ||||||||||||||||| | || || |||||| ||||||| Sbjct 145 TTTACTGTGAGTAAAATAGAGTGTTCAAAGCAGACATTATGTCAATGAATACGTTAGCAT 204 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCC--GTAATG 188 ||||||||| ||||||| | | |||||||||||||||| ||| | |||||| Sbjct 205 GGAATAATAAGATAGGACCTTGG--TCTATTTTGTTGGTTT----GACTCCAAGGTAATG 258 Query 189 ATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTT 248 ||||||||||| ||| |||||| | |||||||||||||||||||||||||||||||||| Sbjct 259 ATTAATAGGGACAGTTGGGGGTATTCGTATTCAATTGTCAGAGGTGAAATTCTTGGATTT 318 Query 249 ATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGA 308 || |||||| ||||||||||||||| || ||||||||||||||||||||||| |||||| Sbjct 319 ATGGAAGACGAACTACTGCGAAAGCATTTACCAAGGATGTTTTCATTAATCA-AGAACGA 377 Query 309 AAGTTAGGGG 318 |||||||||| Sbjct 378 AAGTTAGGGG 387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 913550480128