Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20]
180,236 sequences; 2,439,301,466 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq180232 352 5e-95
seq180235 307 2e-81
seq79288 275 1e-71
seq180226 259 9e-67
>seq180232
Length=366
Score = 352 bits (390), Expect = 5e-95
Identities = 255/291 (88%), Gaps = 3/291 (1%)
Strand=Plus/Minus
Query 7 GTCCGGCCGGGCCTTTCCTTCTGGG-GATCCG-CATGCCCTTCACTGGGTGTGCCGGGGA 64
||| ||||||| ||| |||||| || || | | ||||| ||| |||||||||| | ||||
Sbjct 290 GTCTGGCCGGGTCTT-CCTTCTTGGTGAACTGGCATGCTCTTTACTGGGTGTGTCAGGGA 232
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
||| ||||||||||||||||||||||||||| ||||||||||| ||||| |||||| ||
Sbjct 231 ACCAAGACTTTTACTTTGAAAAAATTAGAGTGCTCAAAGCAGGCATTTGCCCGAATATAT 172
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184
||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||
Sbjct 171 TAGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAATCGCCGT 112
Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244
||||||||||||||| ||| ||||| | |||||||| || |||||||||||||||||
Sbjct 111 AATGATTAATAGGGACAGTTGGGGGCATTAGTATTCACATGCTAGAGGTGAAATTCTTGG 52
Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATT 295
|||| |||||||||||| |||||||||| || |||||||||||||||||
Sbjct 51 ATTTTGTGAAGACTAACTTCTGCGAAAGCATTTGCCAAGGATGTTTTCATT 1
>seq180235
Length=224
Score = 307 bits (340), Expect = 2e-81
Identities = 204/224 (91%), Gaps = 2/224 (1%)
Strand=Plus/Minus
Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGA 133
||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||
Sbjct 224 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCCCGAATATATTAGCATGGA 165
Query 134 ATAATAGAATAGGACGT-GCGGTTCTATTTTGTTGGTTTCTAGGA-CCGCCGTAATGATT 191
||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||
Sbjct 164 ATAATAGAATAGGACGTTGCGGTCCTATTTTGTTGGTTTCTAGGATCCGCCGTAATGATT 105
Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251
|||||||||||||||||| | ||||||| || ||||||||||||||||||||| |
Sbjct 104 AATAGGGATAGTCGGGGGCATTCGTATTCACATGCTAGAGGTGAAATTCTTGGATTTTGT 45
Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATT 295
|||||| ||||||||||||||| || |||||||||||||||||
Sbjct 44 GAAGACGAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATT 1
>seq79288
Length=336
Score = 275 bits (304), Expect = 1e-71
Identities = 206/238 (87%), Gaps = 4/238 (2%)
Strand=Plus/Plus
Query 62 GGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTT--TGCTCGA 118
||| ||| || || |||| ||||||||||||||||||||||||||||| | ||| ||
Sbjct 99 GGAACCATGAACTGTTACCTTGAAAAAATTAGAGTGTTCAAAGCAGGCTATGATGCCGGA 158
Query 119 ATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGA- 177
|||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 159 ATACATTAGCATGGAATAATGAAATAGGACGTGCGGACCTATTTTGTTGGTTTCTAGGAG 218
Query 178 CCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAA 237
||||||||||||||||||||||||| |||||| | ||||||||| | || |||||||
Sbjct 219 CCGCCGTAATGATTAATAGGGATAGCCGGGGGCATTTGTATTCAATGGCAAGGGGTGAAA 278
Query 238 TTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATT 295
| |||||||| ||||||||| |||| |||||||||| || |||||||||||||||||
Sbjct 279 TCCTTGGATTCATTGAAGACAAACTTCTGCGAAAGCATTTGCCAAGGATGTTTTCATT 336
>seq180226
Length=541
Score = 259 bits (286), Expect = 9e-67
Identities = 210/250 (84%), Gaps = 12/250 (5%)
Strand=Plus/Plus
Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC---GAATACATTAGCAT 130
|||||| ||| ||| ||||||||||||||||| | || || |||||| |||||||
Sbjct 145 TTTACTGTGAGTAAAATAGAGTGTTCAAAGCAGACATTATGTCAATGAATACGTTAGCAT 204
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCC--GTAATG 188
||||||||| ||||||| | | |||||||||||||||| ||| | ||||||
Sbjct 205 GGAATAATAAGATAGGACCTTGG--TCTATTTTGTTGGTTT----GACTCCAAGGTAATG 258
Query 189 ATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTT 248
||||||||||| ||| |||||| | ||||||||||||||||||||||||||||||||||
Sbjct 259 ATTAATAGGGACAGTTGGGGGTATTCGTATTCAATTGTCAGAGGTGAAATTCTTGGATTT 318
Query 249 ATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGA 308
|| |||||| ||||||||||||||| || ||||||||||||||||||||||| ||||||
Sbjct 319 ATGGAAGACGAACTACTGCGAAAGCATTTACCAAGGATGTTTTCATTAATCA-AGAACGA 377
Query 309 AAGTTAGGGG 318
||||||||||
Sbjct 378 AAGTTAGGGG 387
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 913550480128
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |