Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq90891 316 8e-84 seq158751 179 2e-42 seq118188 154 6e-35 >seq90891 Length=3057 Score = 316 bits (350), Expect = 8e-84 Identities = 177/178 (99%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 28 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 87 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2948 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 2889 Query 88 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2888 CTAAAGCTAAATACTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 2829 Query 148 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCA 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2828 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCA 2771 >seq158751 Length=1110 Score = 179 bits (198), Expect = 2e-42 Identities = 138/164 (84%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 33 CTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAA 92 |||||| |||||||||||||||||| ||||||||||| ||| |||||||| | |||||| Sbjct 768 CTTCGAAGAGTCGAGTTGTTTGGGATTGCAGCTCTAAGCGGGTGGTAAATTCCATCTAAA 827 Query 93 GCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCAC 152 ||||||||| | |||||| |||||| ||||||| |||| ||||||||||||| || Sbjct 828 GCTAAATATGGATGGGAGACCAATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAAC 887 Query 153 TTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAA 196 |||| ||||||||| ||| || || |||||||| ||||| |||| Sbjct 888 TTTGAAAAGAGAGTGAAATAGTACCTGAAATTGCTGAAAAGGAA 931 >seq118188 Length=1516 Score = 154 bits (170), Expect = 6e-35 Identities = 106/120 (88%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623 |||||||||||||||||||||||||||||| ||| |||| |||||||| |||||||||| Sbjct 1515 TGTTGGGACCCGAAAGATGGTGAACTATGCTTGAGTAGGACGAAGCCAGGGGAAACTCTG 1456 Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||| || |||| |||| ||||||||| ||||||| || |||||||||||||||| Sbjct 1455 GTGGAGGTCCGTAGCGATTCTAACGTGCAAATTGATCGTCGAACTTGGGTATAGGGGCGA 1396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2076133937800