Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20]
180,236 sequences; 2,439,301,466 total letters
Query= AAMG01000370.1
Length=180
Score E
Sequences producing significant alignments: (Bits) Value
seq4656 168 6e-40
seq90407 102 8e-20
seq71469 96.9 3e-18
seq4984 96.9 3e-18
seq176208 89.7 5e-16
seq44255 89.7 5e-16
seq16024 86.0 6e-15
>seq4656
Length=104629
Score = 168 bits (186), Expect = 6e-40
Identities = 145/180 (81%), Gaps = 7/180 (4%)
Strand=Plus/Minus
Query 1 GGCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAG 60
|||| |||| ||||| |||||||||| ||||||| ||||||||||||||||||||| |||
Sbjct 93436 GGCACACGGGGGATGTCTAGGCTCTCAGAGGCGATGAAGGACGTGATAAGCTGCGATAAG 93377
Query 61 CTACGGGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGATATA 120
| |||||||| |||| || ||||| ||||||| ||| |||||||||||||||||| ||
Sbjct 93376 CCACGGGGATCGGCAAATGCGAATCGATCCGTGGATCTCCGAATGGGGCAACCCGGCATG 93317
Query 121 TTGGAGATATATCATAACGCTAGGCGTTAGGCGAACGTGGGGAACTGAAACATCTAAGTA 180
||| ||| || ||| | | | ||||||| | |||||||||||||||||||
Sbjct 93316 TTGAAGACATGCCATCA-------AATGAAGCGAACGCGCCGAACTGAAACATCTAAGTA 93264
>seq90407
Length=3072
Score = 102 bits (112), Expect = 8e-20
Identities = 94/115 (82%), Gaps = 3/115 (3%)
Strand=Plus/Plus
Query 2 GCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGC 61
||| ||||||||||||| ||| || ||||||| ||| ||||||||| |||||| ||||
Sbjct 396 GCATACGGTGGATGCCTTGGCAGTCAGAGGCGATGAAAGACGTGATAGCCTGCGATAAGC 455
Query 62 TACGGGGA-TTGGCACATACGAAT-TGATCCGTAGATATCCGAATGGGGCAACCC 114
| |||||| | |||| ||| || | ||||||| |||| || |||||||| |||||
Sbjct 456 TTCGGGGAGTCGGCAAATA-GACTGTGATCCGGAGATCTCTGAATGGGGGAACCC 509
>seq71469
Length=5065
Score = 96.9 bits (106), Expect = 3e-18
Identities = 136/185 (74%), Gaps = 12/185 (6%)
Strand=Plus/Minus
Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67
||||||||||| ||| || ||||||| ||| ||||||| | |||||||||||| ||||
Sbjct 4627 GGTGGATGCCTTGGCAGTCAGAGGCGACGAAAGACGTGACAGCCTGCGAAAAGCTCCGGG 4568
Query 68 GA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC-GATAT-ATTGG 124
|| |||| ||| |||||||| |||| || |||||||| ||||| ||| || |
Sbjct 4567 GAGGCGGCAAATATCCTTTGATCCGGAGATGTCTGAATGGGGGAACCCACTTATCATAAG 4508
Query 125 AGATATATCATA-AC------GCTAG--GCGTTAGGCGAACGTGGGGAACTGAAACATCT 175
| | ||| | | || ||| | || ||||||||| |||||| ||||||||||
Sbjct 4507 ATAGGTATTACACACTGAATACATAGGTGTGTAAGGCGAACGAGGGGAAGTGAAACATCT 4448
Query 176 AAGTA 180
||||
Sbjct 4447 CAGTA 4443
>seq4984
Length=100180
Score = 96.9 bits (106), Expect = 3e-18
Identities = 133/179 (74%), Gaps = 14/179 (8%)
Strand=Plus/Minus
Query 10 TGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGGGA 69
||||||||| ||| | ||||||| |||||||||| | ||||||| ||||| |||||
Sbjct 69944 TGGATGCCTTGGCGTTAAGAGGCGATGAAGGACGTGGCAGGCTGCGATAAGCTGTGGGGA 69885
Query 70 -TTGGCACATACGAATT--GATCCGTAGATATCCGAATGGGGCAACCCGA-TATATTGG- 124
||| || || |||| |||||| |||| ||||||||||| ||||| | || || |
Sbjct 69884 ATTGTCA---ACAAATTTTGATCCGCAGATTTCCGAATGGGGAAACCCAACTAGCTTAGC 69828
Query 125 -AGATATATCATAACGCTAGG--CGTTAGGCGAACGTGGGGAACTGAAACATCTAAGTA 180
|| ||| |||| ||| | || | || ||| ||| ||||||||| |||||||||
Sbjct 69827 TAGTTATTACATA---CTAAGTATGTAAAGCAAACTTGGTGAACTGAAATATCTAAGTA 69772
>seq176208
Length=855
Score = 89.7 bits (98), Expect = 5e-16
Identities = 78/96 (81%), Gaps = 1/96 (1%)
Strand=Plus/Minus
Query 2 GCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGC 61
||| | ||||||||||| ||| || |||||| |||||||||| || |||||||||||
Sbjct 96 GCACATGGTGGATGCCTTGGCAGTCATAGGCGATGAAGGACGTGGTAGCCTGCGAAAAGC 37
Query 62 TACGGGGA-TTGGCACATACGAATTGATCCGTAGAT 96
|||||||| ||||| | | | |||||||||||||
Sbjct 36 TACGGGGAGCTGGCAAACAAGCTTTGATCCGTAGAT 1
>seq44255
Length=9396
Score = 89.7 bits (98), Expect = 5e-16
Identities = 84/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67
|||| |||||| ||| | |||||| ||||||||||||| ||||||| |||| | |||
Sbjct 7837 GGTGAATGCCTTGGCATGCACAGGCGATGAAGGACGTGATACGCTGCGATAAGCCATGGG 7778
Query 68 GATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114
|| || ||| | ||||||||| ||| ||||||||||| |||||
Sbjct 7777 GAGCTGCGAATAGGCTTTGATCCGTGGATTTCCGAATGGGGAAACCC 7731
>seq16024
Length=37459
Score = 86.0 bits (94), Expect = 6e-15
Identities = 89/114 (78%), Gaps = 2/114 (2%)
Strand=Plus/Plus
Query 2 GCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGC 61
||| ||||||||||||| ||| || ||||||| |||||||||| | ||||||||||
Sbjct 22269 GCACACGGTGGATGCCTTGGCGGTCAGAGGCGATGAAGGACGTGGCAGCCTGCGAAAAGT 22328
Query 62 TACGGGGA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114
|||||| ||||| | | | |||||||| || ||||||||||| |||||
Sbjct 22329 ATCGGGGAGCTGGCA-ACAAGCTTTGATCCGGTAATGTCCGAATGGGGAAACCC 22381
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475967489916
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |