Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq48204 340 5e-91 seq5165 295 2e-77 seq89015 271 2e-70 seq1223 226 7e-57 seq21163 172 1e-40 seq140972 111 4e-22 seq4656 82.4 2e-13 >seq48204 Length=5524 Score = 340 bits (376), Expect = 5e-91 Identities = 325/411 (79%), Gaps = 5/411 (1%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5064 TACCTGCAGAAAAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 5005 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAA-GACAGGTG 121 ||||||| |||||||| ||||||||||| | || ||||||| ||| | | | || Sbjct 5004 GAGCGTTATCCGGAATTATTGGGCGTAAAGAGCTCGTAGGCGGTC-TGTCGCGTCTGCTG 4946 Query 122 TGAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAG 181 ||||| ||| |||| ||||| || ||||| | | || | |||||||||| | || Sbjct 4945 TGAAAACCCGAGGCTCAACCTCGGGCTTGCAGTGGGTACGGGCAGACTAGAGTGCGGTAG 4886 Query 182 AGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATG 241 || | ||||||||| ||||||| ||| |||||| |||||| ||||||||||| ||| Sbjct 4885 GGGAGATTGGAATTCCTGGTGTAGCGGTGGAATGCGCAGATATCAGGAGGAACACCGATG 4826 Query 242 GCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACA 301 |||||||||| | ||||| ||||||||| | | |||||| |||||||||||||| Sbjct 4825 GCGAAGGCAGATCTCTGGGCCGTAACTGACGCTGAGGAGCGAAAGGGTGGGGAGCAAACA 4766 Query 302 GGATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGG--GATT- 358 || |||||||||||||||||||||||| |||||| | |||||| ||| ||| ||| Sbjct 4765 GGCTTAGATACCCTGGTAGTCCACGCCGTAAACGTTGGGAACTAGATGTGGGGACCATTC 4706 Query 359 TACTTCCTTGGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || || || |||||||||||| | ||||| ||||||||||| ||| Sbjct 4705 CACGGTCTCCGTGTCGTAGCTAACGCATTAAGTTCCCCGCCTGGGGAGTAC 4655 >seq5165 Length=98167 Score = 295 bits (326), Expect = 2e-77 Identities = 306/400 (77%), Gaps = 2/400 (1%) Strand=Plus/Plus Query 10 AGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTT 69 |||| ||| | |||||||| |||||||||||||||||||||||| || | || |||||| Sbjct 34513 AGAAGAAGTCCTGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGAGGGCTAGCGTT 34572 Query 70 AATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCC 129 | ||||||| | ||||||||||| | ||| |||||| | ||||| | ||||||||| Sbjct 34573 ATTCGGAATCATTGGGCGTAAAGGGCGCGTAGGCGGGTTAGTAAGTTAAAAGTGAAATCC 34632 Query 130 CCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGT 189 | |||| ||||| |||| ||| ||| ||||| | |||||| || ||||| | Sbjct 34633 CAAGGCTCAACCTTGGAACTGCTTTTAAAACTGCTAGTCTAGAGATTGAAAGAGGATAGA 34692 Query 190 GGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249 |||||||| |||||| ||||||| |||| |||| |||||||||||| |||||||||| Sbjct 34693 GGAATTCCTAGTGTAGAGGTGAAATTCGTAAATATTAGGAGGAACACCAGTGGCGAAGGC 34752 Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 309 | |||| || |||||||| | || |||| |||||||||||||||||||||||| Sbjct 34753 GTCTATCTGGTTCAAATCTGACGCTGAGGCGCGAAGGCGTGGGGAGCAAACAGGATTAGA 34812 Query 310 TACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACTTCCTTGG 369 |||||||||||||||||| |||||||| || | | || |||||||| || | Sbjct 34813 TACCCTGGTAGTCCACGCTGTAAACGATGAATGTTAAATATGGGAAATTTACTTTCT--G 34870 Query 370 TAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || ||||||||||| || ||||||||||| ||| Sbjct 34871 TATTACAGCTAACGCGTTAAACATTCCGCCTGGGGACTAC 34910 >seq89015 Length=3127 Score = 271 bits (300), Expect = 2e-70 Identities = 261/335 (78%), Gaps = 0/335 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 |||| || ||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct 2954 TACCAGATGAATAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGC 2895 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 ||||||| |||| ||| |||| ||||| ||||| |||||| ||| |||| ||| || Sbjct 2894 AAGCGTTGTCCGGATTTATTGGGTTTAAAGGGTGCGTAGGCGGCTGTTTAAGTCAGCGGT 2835 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 |||| | |||| |||| | | ||| ||| |||| | | || |||||| || Sbjct 2834 GAAAGACATCGGCTCAACCGATGCAGTGCCGTTGATACTGGATGGCTTGAGTGTTGGAGG 2775 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || ||||||| ||||||| ||||||||| |||||| ||||||||| || | Sbjct 2774 GGTACATGGAATTGATGGTGTAGCGGTGAAATGCATAGATACCATCAGGAACACCGATAG 2715 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 |||||||| |||| | ||||||||| | |||||||||| |||||||| ||||| Sbjct 2714 CGAAGGCATTGTACTGGCCAACAACTGACGCTGAGGCACGAAAGCATGGGGAGCGAACAG 2655 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 |||||||||||||||||||||| ||| |||||||| Sbjct 2654 GATTAGATACCCTGGTAGTCCATGCCGTAAACGAT 2620 >seq1223 Length=197574 Score = 226 bits (250), Expect = 7e-57 Identities = 262/353 (74%), Gaps = 0/353 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 |||| ||||||||| | ||||||||| |||||||||||||||||||||||| ||| | | Sbjct 338 TACCGTAAGAATAAGGATCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGATCC 397 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||| ||||| || || |||||| | |||| ||| || Sbjct 398 AAGCGTTATCCGGAATCATTGGGTTTAAAGGGTCCGTAGGCGGCCTTATAAGTCAGCGGT 457 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 |||| ||||||||| |||||| ||| |||| | | || || | | || Sbjct 458 GAAAGTTTTTGGCTTAACCAAAAAATTGCCATTGATACTGTAGGGCTTGAATTATTGTGA 517 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 | | |||| ||||||| ||||||||| ||||||| |||| |||||| | Sbjct 518 AGTAACTAGAATATGTAGTGTAGCGGTGAAATGCTTAGATATTACATGGAATACCAATTG 577 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 ||||||||| || | | ||||||| ||| ||||||||||||| ||| ||||| Sbjct 578 CGAAGGCAGGTTACTAACAATGGATTGACGCTGATGGACGAAAGCGTGGGTAGCGAACAG 637 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGG 355 |||||||||||||||||||||||||| |||||||| ||||| |||| ||| Sbjct 638 GATTAGATACCCTGGTAGTCCACGCCGTAAACGATGGATACTAGCTGTTTGGG 690 >seq21163 Length=23524 Score = 172 bits (190), Expect = 1e-40 Identities = 190/253 (75%), Gaps = 0/253 (0%) Strand=Plus/Plus Query 58 GGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACA 117 ||||||||||||| |||| ||| |||| ||||| || || |||||| | |||||| || Sbjct 4719 GGTGCAAGCGTTATCCGGATTTATTGGGTTTAAAGGGTCCGTAGGCGGATCTGTAAGTCA 4778 Query 118 GGTGTGAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTG 177 | |||||||| ||||||||| | || ||| ||| |||||| | || |||| | Sbjct 4779 GTGGTGAAATCTTTCGGCTTAACCGGAAAACTGCCATTGATACTGCAGGTCTTGAGTAAG 4838 Query 178 TCAGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACC 237 ||| | || |||||| ||||||| ||||||||| ||||||| ||||||| Sbjct 4839 GTAGAAGTGGCTGGAATAAGTAGTGTAGCGGTGAAATGCATAGATATTACTTAGAACACC 4898 Query 238 AATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCA 297 ||| |||||||||| | || | ||||||||| ||| ||||||||||||||||| Sbjct 4899 AATTGCGAAGGCAGGTCACTATGTCTTAACTGACGCTGATGGACGAAAGCGTGGGGAGCG 4958 Query 298 AACAGGATTAGAT 310 ||||||||||||| Sbjct 4959 AACAGGATTAGAT 4971 >seq140972 Length=1238 Score = 111 bits (122), Expect = 4e-22 Identities = 224/329 (68%), Gaps = 10/329 (3%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || || ||||| || | ||||||||| |||||||||||||||||||||||| |||| | Sbjct 754 TAGCTAAAGAAGAAACCCCGGCTAACCTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGT 695 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAG---GCGGTTGTGTAAGACAGG 119 ||| ||| | ||| | ||||||||||| || || || || ||| | || Sbjct 694 GAGCATTATCCAAAATGATTGGGCGTAAAGGGTTCGTAGATTGCAAATGTTTT---CATA 638 Query 120 TGTGAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTC 179 ||||||| |||| | || ||| | || ||| | || |||| | | Sbjct 637 TGTGAAAGTTTAA---TTAAAATTAAAAATGCGTATGATACTCCTTTGCTTGAGTATATT 581 Query 180 AGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAA 239 | | ||||| | | || |||||||| | ||||| | || ||||| ||| Sbjct 580 ATGAGATAACAGAATTTTATAGGGAGGAGTGAAATCCATAGATCTATGAAGGAATGCCAG 521 Query 240 TGGCGAAGGCAGCCCCCTGGGATAAC-ACTGACGCTCATGCACGAAAGCGTGGGGAGCAA 298 ||||| | || | || | ||| |||||| | | | |||||||| |||||||||| Sbjct 520 TGGCGGAAGCGGTTATCTAGAATATTTACTGACATTGAGGAACGAAAGCATGGGGAGCAA 461 Query 299 ACAGGATTAGATACCCTGGTAGTCCACGC 327 |||||||||||||||||||||||||| || Sbjct 460 ACAGGATTAGATACCCTGGTAGTCCATGC 432 >seq4656 Length=104629 Score = 82.4 bits (90), Expect = 2e-13 Identities = 91/120 (76%), Gaps = 10/120 (8%) Strand=Plus/Minus Query 298 AACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGAT 357 |||||||||||||||||||||||||||||||||||||||| ||| | |||| | ||| Sbjct 92243 AACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGATGACTCGATGTTTGCGAT 92184 Query 358 TTACTTCCTTGGTAA-CGT---AGCTAACGCGTGAAGTTGACCGCCTGGGGAATACTCCC 413 ||| |||| ||| ||| || |||| |||| || |||||||| ||| ||| Sbjct 92183 ATAC------AGTAAGCGTCCAAGCGAAAGCGTTAAGTCATCCACCTGGGGAGTACGCCC 92130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1287275676544