Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20]
180,236 sequences; 2,439,301,466 total letters
Query= AAMG01000538.1
Length=248
Score E
Sequences producing significant alignments: (Bits) Value
seq48204 251 1e-64
seq44255 174 2e-41
seq4984 141 1e-31
seq146714 138 2e-30
seq1223 132 7e-29
>seq48204
Length=5524
Score = 251 bits (278), Expect = 1e-64
Identities = 208/252 (83%), Gaps = 5/252 (2%)
Strand=Plus/Plus
Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60
|||| ||||||| |||||||||||||||||||||||||||||| ||| | | ||| ||||
Sbjct 305 CTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGTCTTGC-GACTTGGCAC 363
Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTC- 119
|||||||||||||||||||||||||||| ||| ||| |||||||| ||||||| ||
Sbjct 364 GGACCTGTGTTTTTAGTAAACAGTCGCTACCCACTAGTCTCTGCGGCCACCACACCCTTT 423
Query 120 ---AACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGC 176
| || ||| | | | ||| ||||||||||||||||||||||| ||||||||
Sbjct 424 CGGAGCAAGTCCTAATACGTCGAAGGCCCCCCTTCTCCCGAAGTTACGGGGGCATTTTGC 483
Query 177 CGAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGT 236
||| |||||||||||| ||| | ||| | |||| |||||||||||||||||||||| ||
Sbjct 484 CGAGTTCCTTAACCACGATTCTCTCGATCTCCTTGGTATTCTCTACCTGACCACCTGAGT 543
Query 237 CGGTTTACGGTA 248
|||||| ||||
Sbjct 544 CGGTTTGGGGTA 555
>seq44255
Length=9396
Score = 174 bits (192), Expect = 2e-41
Identities = 190/248 (77%), Gaps = 11/248 (4%)
Strand=Plus/Plus
Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60
|||| ||||||| ||||||||||||||||| || ||||| ||| ||| | | |||||||
Sbjct 6068 CTTAACCTTCCAGCACCGGGCAGGCGTCAGACCCTATACGTCGTCTTGC-GACTTCGCAG 6126
Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120
| ||||||||||| |||||||||||| ||| || ||| ||| ||||||| | ||
Sbjct 6127 AGCCCTGTGTTTTTGATAAACAGTCGCTACCCCCTGGTCTGTGCCACCACCAATAACT-- 6184
Query 121 ACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAA 180
|||| | | || | || | ||||| ||||||||||| | || ||||||||
Sbjct 6185 ----TGCGTT--ACTGGAG-GTCA-CGCTTCTTCCGAAGTTACGCGTGCAATTTGCCGAG 6236
Query 181 TTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGT 240
|||||| | | |||||| | | | |||||| |||| ||||||| | ||||||||||||||
Sbjct 6237 TTCCTTCAACGCAGTTCTCTCAAGCGCCTTGGTATACTCTACCAGTCCACCTGTGTCGGT 6296
Query 241 TTACGGTA 248
||| ||||
Sbjct 6297 TTAGGGTA 6304
>seq4984
Length=100180
Score = 141 bits (156), Expect = 1e-31
Identities = 182/247 (74%), Gaps = 12/247 (5%)
Strand=Plus/Plus
Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACG 61
||| ||||||| ||||||||||||||||| || ||||| || |||| | || || |||
Sbjct 68226 TTAACCTTCCAGCACCGGGCAGGCGTCAGACCCTATACTTCCACTTGC-GTGTTTGCAGA 68284
Query 62 GACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAA 121
| ||||||||||||||||||||||||| | | ||||| | || ||||| ||||
Sbjct 68285 GTCCTGTGTTTTTAGTAAACAGTCGCTACTCCCTATTTTGTG------CCACCTACTCA- 68337
Query 122 CACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAAT 181
|| | | |||| || ||||||| |||||||||| || | |||||||| |
Sbjct 68338 -TAGTTGCCTAAAAGCA--GGTTACCCTTCTTCCGAAGTTACAGGTATAATTTGCCGAGT 68394
Query 182 TCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTT 241
||||| | || ||| | ||| ||||||||| |||||| ||||| |||||||||
Sbjct 68395 TCCTTCAACATCATTCTTTC-AACACCTTAGTATACTCTACTCATCCACCAGTGTCGGTT 68453
Query 242 TACGGTA 248
| |||||
Sbjct 68454 TGCGGTA 68460
>seq146714
Length=1191
Score = 138 bits (152), Expect = 2e-30
Identities = 181/246 (74%), Gaps = 5/246 (2%)
Strand=Plus/Plus
Query 7 CTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCT 66
|||||| |||||||||||||||| ||| ||||| || |||| | || || ||| || ||
Sbjct 128 CTTCCAGCACCGGGCAGGCGTCACTCCCTATACGTCCACTTTC-GTGTTTGCAGAGAGCT 186
Query 67 GTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCT-CAACACG 125
||||||||| ||||||||||| || | || ||| ||| | | || | ||
Sbjct 187 GTGTTTTTATTAAACAGTCGCAGCCACCATTTTATTGCAACCCCTTCGTCCTTCCACTGT 246
Query 126 TCGT--TCAC-CAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATT 182
|| | ||| | || ||| ||||||||||||||||||| ||| |||||||| ||
Sbjct 247 TCATGGTCAAACTACAAGGGCGTACCTTCTCCCGAAGTTACGGTACCAATTTGCCGAGTT 306
Query 183 CCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTT 242
|||| || ||||| | | | |||||||| || ||| || | ||||||||||||||||
Sbjct 307 CCTTCTCCTGAGTTCTCTCAAGCGCCTTAGAATACTCATCCCGCCCACCTGTGTCGGTTT 366
Query 243 ACGGTA 248
|||||
Sbjct 367 GCGGTA 372
>seq1223
Length=197574
Score = 132 bits (146), Expect = 7e-29
Identities = 178/248 (72%), Gaps = 21/248 (8%)
Strand=Plus/Minus
Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60
|||| ||||||| ||||||||||| ||||| || ||||| || ||||| | || |||
Sbjct 4214 CTTAACCTTCCAGCACCGGGCAGGTGTCAGGCCCTATACTTCATCTTACGAT-TTGGCAG 4156
Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120
| ||||||||||| ||||||||||| | || ||| ||||| |||| || |
Sbjct 4155 AGCCCTGTGTTTTTGATAAACAGTCGCCTGGACCTTTTCACTGCGGCCACG-CCTG---- 4101
Query 121 ACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAA 180
||| ||||| || ||||||||||||||| || | |||||||| ||
Sbjct 4100 --------------AGC-GTGGCGACCTTTCTCCCGAAGTTACAGGTCTATTTTGCCTAA 4056
Query 181 TTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGT 240
||||||| ||| || | ||| | ||| || || |||| | ||||||||||||||||
Sbjct 4055 TTCCTTAGCCATGAATCTCTCGAGCACCTGAGGATACTCTCCTCGACCACCTGTGTCGGT 3996
Query 241 TTACGGTA 248
|| |||||
Sbjct 3995 TTGCGGTA 3988
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 693187552428
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |