Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq48204 251 1e-64 seq44255 174 2e-41 seq4984 141 1e-31 seq146714 138 2e-30 seq1223 132 7e-29 >seq48204 Length=5524 Score = 251 bits (278), Expect = 1e-64 Identities = 208/252 (83%), Gaps = 5/252 (2%) Strand=Plus/Plus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| ||||||| |||||||||||||||||||||||||||||| ||| | | ||| |||| Sbjct 305 CTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGTCTTGC-GACTTGGCAC 363 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTC- 119 |||||||||||||||||||||||||||| ||| ||| |||||||| ||||||| || Sbjct 364 GGACCTGTGTTTTTAGTAAACAGTCGCTACCCACTAGTCTCTGCGGCCACCACACCCTTT 423 Query 120 ---AACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGC 176 | || ||| | | | ||| ||||||||||||||||||||||| |||||||| Sbjct 424 CGGAGCAAGTCCTAATACGTCGAAGGCCCCCCTTCTCCCGAAGTTACGGGGGCATTTTGC 483 Query 177 CGAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGT 236 ||| |||||||||||| ||| | ||| | |||| |||||||||||||||||||||| || Sbjct 484 CGAGTTCCTTAACCACGATTCTCTCGATCTCCTTGGTATTCTCTACCTGACCACCTGAGT 543 Query 237 CGGTTTACGGTA 248 |||||| |||| Sbjct 544 CGGTTTGGGGTA 555 >seq44255 Length=9396 Score = 174 bits (192), Expect = 2e-41 Identities = 190/248 (77%), Gaps = 11/248 (4%) Strand=Plus/Plus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| ||||||| ||||||||||||||||| || ||||| ||| ||| | | ||||||| Sbjct 6068 CTTAACCTTCCAGCACCGGGCAGGCGTCAGACCCTATACGTCGTCTTGC-GACTTCGCAG 6126 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 | ||||||||||| |||||||||||| ||| || ||| ||| ||||||| | || Sbjct 6127 AGCCCTGTGTTTTTGATAAACAGTCGCTACCCCCTGGTCTGTGCCACCACCAATAACT-- 6184 Query 121 ACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAA 180 |||| | | || | || | ||||| ||||||||||| | || |||||||| Sbjct 6185 ----TGCGTT--ACTGGAG-GTCA-CGCTTCTTCCGAAGTTACGCGTGCAATTTGCCGAG 6236 Query 181 TTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGT 240 |||||| | | |||||| | | | |||||| |||| ||||||| | |||||||||||||| Sbjct 6237 TTCCTTCAACGCAGTTCTCTCAAGCGCCTTGGTATACTCTACCAGTCCACCTGTGTCGGT 6296 Query 241 TTACGGTA 248 ||| |||| Sbjct 6297 TTAGGGTA 6304 >seq4984 Length=100180 Score = 141 bits (156), Expect = 1e-31 Identities = 182/247 (74%), Gaps = 12/247 (5%) Strand=Plus/Plus Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACG 61 ||| ||||||| ||||||||||||||||| || ||||| || |||| | || || ||| Sbjct 68226 TTAACCTTCCAGCACCGGGCAGGCGTCAGACCCTATACTTCCACTTGC-GTGTTTGCAGA 68284 Query 62 GACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAA 121 | ||||||||||||||||||||||||| | | ||||| | || ||||| |||| Sbjct 68285 GTCCTGTGTTTTTAGTAAACAGTCGCTACTCCCTATTTTGTG------CCACCTACTCA- 68337 Query 122 CACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAAT 181 || | | |||| || ||||||| |||||||||| || | |||||||| | Sbjct 68338 -TAGTTGCCTAAAAGCA--GGTTACCCTTCTTCCGAAGTTACAGGTATAATTTGCCGAGT 68394 Query 182 TCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTT 241 ||||| | || ||| | ||| ||||||||| |||||| ||||| ||||||||| Sbjct 68395 TCCTTCAACATCATTCTTTC-AACACCTTAGTATACTCTACTCATCCACCAGTGTCGGTT 68453 Query 242 TACGGTA 248 | ||||| Sbjct 68454 TGCGGTA 68460 >seq146714 Length=1191 Score = 138 bits (152), Expect = 2e-30 Identities = 181/246 (74%), Gaps = 5/246 (2%) Strand=Plus/Plus Query 7 CTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCT 66 |||||| |||||||||||||||| ||| ||||| || |||| | || || ||| || || Sbjct 128 CTTCCAGCACCGGGCAGGCGTCACTCCCTATACGTCCACTTTC-GTGTTTGCAGAGAGCT 186 Query 67 GTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCT-CAACACG 125 ||||||||| ||||||||||| || | || ||| ||| | | || | || Sbjct 187 GTGTTTTTATTAAACAGTCGCAGCCACCATTTTATTGCAACCCCTTCGTCCTTCCACTGT 246 Query 126 TCGT--TCAC-CAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATT 182 || | ||| | || ||| ||||||||||||||||||| ||| |||||||| || Sbjct 247 TCATGGTCAAACTACAAGGGCGTACCTTCTCCCGAAGTTACGGTACCAATTTGCCGAGTT 306 Query 183 CCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTT 242 |||| || ||||| | | | |||||||| || ||| || | |||||||||||||||| Sbjct 307 CCTTCTCCTGAGTTCTCTCAAGCGCCTTAGAATACTCATCCCGCCCACCTGTGTCGGTTT 366 Query 243 ACGGTA 248 ||||| Sbjct 367 GCGGTA 372 >seq1223 Length=197574 Score = 132 bits (146), Expect = 7e-29 Identities = 178/248 (72%), Gaps = 21/248 (8%) Strand=Plus/Minus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| ||||||| ||||||||||| ||||| || ||||| || ||||| | || ||| Sbjct 4214 CTTAACCTTCCAGCACCGGGCAGGTGTCAGGCCCTATACTTCATCTTACGAT-TTGGCAG 4156 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 | ||||||||||| ||||||||||| | || ||| ||||| |||| || | Sbjct 4155 AGCCCTGTGTTTTTGATAAACAGTCGCCTGGACCTTTTCACTGCGGCCACG-CCTG---- 4101 Query 121 ACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAA 180 ||| ||||| || ||||||||||||||| || | |||||||| || Sbjct 4100 --------------AGC-GTGGCGACCTTTCTCCCGAAGTTACAGGTCTATTTTGCCTAA 4056 Query 181 TTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGT 240 ||||||| ||| || | ||| | ||| || || |||| | |||||||||||||||| Sbjct 4055 TTCCTTAGCCATGAATCTCTCGAGCACCTGAGGATACTCTCCTCGACCACCTGTGTCGGT 3996 Query 241 TTACGGTA 248 || ||||| Sbjct 3995 TTGCGGTA 3988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 693187552428