Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq1223 138 1e-30 seq146714 84.2 2e-14 seq48204 84.2 2e-14 seq44255 82.4 8e-14 >seq1223 Length=197574 Score = 138 bits (152), Expect = 1e-30 Identities = 137/175 (78%), Gaps = 3/175 (2%) Strand=Plus/Plus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81 ||||||| |||||| || |||| | || ||| || ||| ||| ||| || ||| || || Sbjct 3991 CGCAAACCGACACAGGTGGTCGAGGAGAGTATCCTCAGGTGCTCGAGAGATTCATGGCTA 4050 Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGA 141 ||||| |||||||| | ||||||||||||||| ||| |||| | || | | | | Sbjct 4051 AGGAATTAGGCAAAATAGACCTGTAACTTCGGGAGAAA-GGTCGCCACGC--TCAGGCGT 4107 Query 142 GGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 || ||||| ||| |||||||||| |||||||| ||||||||||||||| |||||| Sbjct 4108 GGCCGCAGTGAAAAGGTCCAGGCGACTGTTTATCAAAAACACAGGGCTCTGCCAA 4162 >seq146714 Length=1191 Score = 84.2 bits (92), Expect = 2e-14 Identities = 79/98 (81%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAA-TCACGGTT 80 ||||||| |||||| || | |||| ||| ||| |||||||||||||| ||| ||| || Sbjct 369 CGCAAACCGACACAGGTGGGCGGGATGAGTATTCTAAGGCGCTTGAGAGAACTCA-GGAG 311 Query 81 AAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118 |||||||| |||||| || | |||||||||||| || Sbjct 310 AAGGAACTCGGCAAATTGGTACCGTAACTTCGGGAGAA 273 >seq48204 Length=5524 Score = 84.2 bits (92), Expect = 2e-14 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| ||| || || ||| ||| || |||| |||| | | ||| ||||| ||||||| Sbjct 550 CAAACCGACTCAGGTGGTCAGGTAGAGAATACCAAGGAGATCGAGAGAATCGTGGTTAAG 491 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGG 122 ||||| |||||| || ||| |||||||||||| || ||| Sbjct 490 GAACTCGGCAAAATGCCCCCGTAACTTCGGGAGAAGGGG 452 >seq44255 Length=9396 Score = 82.4 bits (90), Expect = 8e-14 Identities = 125/179 (70%), Gaps = 7/179 (4%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || | | ||| || ||||| |||||||||||| ||| || | |||| Sbjct 6298 AAACCGACACAGGTGGACTGGTAGAGTATACCAAGGCGCTTGAGAGAACTGCGTTGAAGG 6239 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTAC-------CCAGAAAT 137 |||| |||||| || | |||||||||| | || | ||| | | || || Sbjct 6238 AACTCGGCAAATTGCACGCGTAACTTCGGAAGAAGCGTGACCTCCAGTAACGCAAGTTAT 6179 Query 138 GGGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 || || ||| ||| ||| || |||||||| ||||||||||||||| ||| || Sbjct 6178 TGGTGGTGGCACAGACCAGGGGGTAGCGACTGTTTATCAAAAACACAGGGCTCTGCGAA 6120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530272505544