Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20]
180,236 sequences; 2,439,301,466 total letters
Query= AAMG01000567.1
Length=197
Score E
Sequences producing significant alignments: (Bits) Value
seq1223 138 1e-30
seq146714 84.2 2e-14
seq48204 84.2 2e-14
seq44255 82.4 8e-14
>seq1223
Length=197574
Score = 138 bits (152), Expect = 1e-30
Identities = 137/175 (78%), Gaps = 3/175 (2%)
Strand=Plus/Plus
Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81
||||||| |||||| || |||| | || ||| || ||| ||| ||| || ||| || ||
Sbjct 3991 CGCAAACCGACACAGGTGGTCGAGGAGAGTATCCTCAGGTGCTCGAGAGATTCATGGCTA 4050
Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGA 141
||||| |||||||| | ||||||||||||||| ||| |||| | || | | | |
Sbjct 4051 AGGAATTAGGCAAAATAGACCTGTAACTTCGGGAGAAA-GGTCGCCACGC--TCAGGCGT 4107
Query 142 GGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196
|| ||||| ||| |||||||||| |||||||| ||||||||||||||| ||||||
Sbjct 4108 GGCCGCAGTGAAAAGGTCCAGGCGACTGTTTATCAAAAACACAGGGCTCTGCCAA 4162
>seq146714
Length=1191
Score = 84.2 bits (92), Expect = 2e-14
Identities = 79/98 (81%), Gaps = 2/98 (2%)
Strand=Plus/Minus
Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAA-TCACGGTT 80
||||||| |||||| || | |||| ||| ||| |||||||||||||| ||| ||| ||
Sbjct 369 CGCAAACCGACACAGGTGGGCGGGATGAGTATTCTAAGGCGCTTGAGAGAACTCA-GGAG 311
Query 81 AAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118
|||||||| |||||| || | |||||||||||| ||
Sbjct 310 AAGGAACTCGGCAAATTGGTACCGTAACTTCGGGAGAA 273
>seq48204
Length=5524
Score = 84.2 bits (92), Expect = 2e-14
Identities = 78/99 (79%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83
||||| ||| || || ||| ||| || |||| |||| | | ||| ||||| |||||||
Sbjct 550 CAAACCGACTCAGGTGGTCAGGTAGAGAATACCAAGGAGATCGAGAGAATCGTGGTTAAG 491
Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGG 122
||||| |||||| || ||| |||||||||||| || |||
Sbjct 490 GAACTCGGCAAAATGCCCCCGTAACTTCGGGAGAAGGGG 452
>seq44255
Length=9396
Score = 82.4 bits (90), Expect = 8e-14
Identities = 125/179 (70%), Gaps = 7/179 (4%)
Strand=Plus/Minus
Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84
|||| |||||| || | | ||| || ||||| |||||||||||| ||| || | ||||
Sbjct 6298 AAACCGACACAGGTGGACTGGTAGAGTATACCAAGGCGCTTGAGAGAACTGCGTTGAAGG 6239
Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTAC-------CCAGAAAT 137
|||| |||||| || | |||||||||| | || | ||| | | || ||
Sbjct 6238 AACTCGGCAAATTGCACGCGTAACTTCGGAAGAAGCGTGACCTCCAGTAACGCAAGTTAT 6179
Query 138 GGGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196
|| || ||| ||| ||| || |||||||| ||||||||||||||| ||| ||
Sbjct 6178 TGGTGGTGGCACAGACCAGGGGGTAGCGACTGTTTATCAAAAACACAGGGCTCTGCGAA 6120
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 530272505544
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |