Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq146714 143 3e-32 seq4984 129 6e-28 seq44255 105 6e-21 seq48204 91.5 1e-16 seq1223 91.5 1e-16 >seq146714 Length=1191 Score = 143 bits (158), Expect = 3e-32 Identities = 88/94 (94%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 65 GCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTG 124 |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| | Sbjct 210 GCTGCGACTGTTTAATAAAAACACAGCTCTCTGCAAACACGAAAGTGGACGTATAGGGAG 151 Query 125 TGACGCCTGCCCGGTGCCGGAAGGTTAATTGATG 158 ||||||||||||||||| ||||| |||| ||||| Sbjct 150 TGACGCCTGCCCGGTGCTGGAAGATTAAATGATG 117 >seq4984 Length=100180 Score = 129 bits (142), Expect = 6e-28 Identities = 80/86 (93%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||||| |||||||||||||| ||||||| ||||||||| ||| Sbjct 68310 GCGACTGTTTACTAAAAACACAGGACTCTGCAAACACGCAAGTGGAAGTATAGGGTCTGA 68251 Query 128 CGCCTGCCCGGTGCCGGAAGGTTAAT 153 |||||||||||||| ||||||||||| Sbjct 68250 CGCCTGCCCGGTGCTGGAAGGTTAAT 68225 >seq44255 Length=9396 Score = 105 bits (116), Expect = 6e-21 Identities = 81/96 (84%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 57 ACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGT 116 |||||| | |||||||||||| |||||||||| |||||| || || ||| ||||| Sbjct 6164 ACCAGGGGGTAGCGACTGTTTATCAAAAACACAGGGCTCTGCGAAGTCGCAAGACGACGT 6105 Query 117 ATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||||||| ||||||||||||||||| |||||||||| Sbjct 6104 ATAGGGTCTGACGCCTGCCCGGTGCTGGAAGGTTAA 6069 >seq48204 Length=5524 Score = 91.5 bits (100), Expect = 1e-16 Identities = 98/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 23 GGACTTGCTCCGTAAGCTCATGCCGGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAA 82 |||||||||||| ||| || || || ||| || || | ||||||||||| ||| Sbjct 435 GGACTTGCTCCGAAAGGGTGTGGTGGCCGCAGAGACTAGTGGGTAGCGACTGTTTACTAA 376 Query 83 AAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCC 142 |||||||| | ||| || || ||| || ||||| || ||||||||||||||||| Sbjct 375 AAACACAGGTCCGTGCCAAGTCGCAAGACGATGTATACGGACTGACGCCTGCCCGGTGCT 316 Query 143 GGAAGGTTAA 152 |||||||||| Sbjct 315 GGAAGGTTAA 306 >seq1223 Length=197574 Score = 91.5 bits (100), Expect = 1e-16 Identities = 71/85 (84%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 |||||||||||| |||||||||| |||||| || || ||| || |||||||| ||| Sbjct 4129 GCGACTGTTTATCAAAAACACAGGGCTCTGCCAAATCGTAAGATGAAGTATAGGGCCTGA 4188 Query 128 CGCCTGCCCGGTGCCGGAAGGTTAA 152 | |||||||||||| |||||||||| Sbjct 4189 CACCTGCCCGGTGCTGGAAGGTTAA 4213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475967489916