Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq44255 390 3e-106 seq146714 358 2e-96 seq48204 331 2e-88 seq4984 300 4e-79 seq1223 224 2e-56 seq21163 194 4e-47 seq40774 102 2e-19 >seq44255 Length=9396 Score = 390 bits (432), Expect = 3e-106 Identities = 337/416 (81%), Gaps = 31/416 (7%) Strand=Plus/Plus Query 8 ACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCA 67 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5891 ACGCTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCTG 5950 Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5951 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 6010 Query 128 CGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACC 187 |||||| |||||||||||||||||| ||||||||||| ||||||| || ||| Sbjct 6011 CGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCGATTCAGAGCTT-GC--------ACC 6061 Query 188 CCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTT 247 || | |||||||||| ||||||||||||||||| |||||||||||| ||| || || Sbjct 6062 CCTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGACCCTATACGTCGTCTTGCGACTT 6121 Query 248 TGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGA 307 |||||| |||||||||| |||||||||||| | |||||| | | | ||| || | Sbjct 6122 CGCAGAGCCCTGTGTTTTTGATAAACAGTCGCTACCCCCTGGTCTGTGCCACCACCAATA 6181 Query 308 GCTTACGGAGCAAGTCCTTCACCCTCACCGGCG--CAC-CTTCTCCCGAAGTTACG-GTG 363 ||| || | || || | ||| ||||| ||||||||||| ||| Sbjct 6182 ACTTGCG-----------------TTACTGGAGGTCACGCTTCTTCCGAAGTTACGCGTG 6224 Query 364 CCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACC 419 | |||||| ||||||||| | ||||||||||||||||||||||| ||||||| Sbjct 6225 -CAATTTGCCGAGTTCCTTCAACGCAGTTCTCTCAAGCGCCTTGGTATACTCTACC 6279 >seq146714 Length=1191 Score = 358 bits (396), Expect = 2e-96 Identities = 303/367 (83%), Gaps = 17/367 (5%) Strand=Plus/Plus Query 64 GCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTA 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 GCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTA 60 Query 124 GGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCT 183 |||||||||| |||||||||||||||||| ||| |||| |||||||||| || Sbjct 61 GGACCGTTATAGTTACGGCCGCCGTTTACTGGGACTTCAGTCAAGAGCTT-GC------- 112 Query 184 AACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCG 243 ||||||||| |||| ||||| |||||||||||||||||| ||||||||||||||||||| Sbjct 113 -ACCCCATCATTTAATCTTCCAGCACCGGGCAGGCGTCACTCCCTATACGTCCACTTTCG 171 Query 244 TGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCC-TGGTATCTTCGACCGG 302 ||||||||||| |||||||||||| |||||||||||||| || | ||| | | ||| Sbjct 172 TGTTTGCAGAGAGCTGTGTTTTTATTAAACAGTCGCAGCCACCATTTTAT-TGCAACCCC 230 Query 303 CATGAGCTT--ACGGAGCAAGTCCTTCACCCT-CACCGGCGCACCTTCTCCCGAAGTTAC 359 | ||| || | || | ||| || || |||| |||||||||||||||||| Sbjct 231 TTCGTCCTTCCACTGTTCATG---GTCAAACTACAAGGGCGTACCTTCTCCCGAAGTTAC 287 Query 360 GGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACC 419 ||| || |||||| ||||||||| || ||||||||||||||||||| | || ||| || Sbjct 288 GGTACCAATTTGCCGAGTTCCTTCTCCTGAGTTCTCTCAAGCGCCTTAGAATACTCATCC 347 Query 420 CAACCAC 426 | |||| Sbjct 348 CGCCCAC 354 >seq48204 Length=5524 Score = 331 bits (366), Expect = 2e-88 Identities = 326/416 (78%), Gaps = 4/416 (1%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCG-GGTGGAGACAGCGCCGCCATCGT 71 ||||||| || | | ||||||| | |||| ||| ||| |||||||| | |||| Sbjct 124 GCATCTTTACTCGTAGTGCAATTTCGCCGAGT-TCGCGGTTGAGACAGCTGGGAAGTCGT 182 Query 72 TACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 183 TACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTT 242 Query 132 ATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCAT 191 || ||||| ||||||||||| ||||||| || |||||||||| | ||||||||| Sbjct 243 ATAGTTACCACCGCCGTTTACTGGGGCTTAAATTCAGAGCTTCGCTTGCGCTAACCCCTC 302 Query 192 CAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCA 251 | |||||||||| ||||||||||||||||| || ||||| || ||| || || ||| Sbjct 303 CTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGTCTTGCGACTTGGCA 362 Query 252 GAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAGCTT 311 | ||||||||||| ||||||||||| | || || ||| || || || ||| Sbjct 363 CGGACCTGTGTTTTTAGTAAACAGTCGCTACCCACTAGTCTCTGCGGCCACCACACCCTT 422 Query 312 ACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTG 371 ||||||||||||| | || ||| | ||||||||||||||||||| | | ||||| Sbjct 423 TCGGAGCAAGTCCTAATACGTCGAAGGCCCCCCTTCTCCCGAAGTTACGGGGGCATTTTG 482 Query 372 CCTAGTTCCTT-CCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426 || |||||||| || ||| ||||||| | | ||||||||||||||||| ||||| Sbjct 483 CCGAGTTCCTTAACCACGA-TTCTCTCGATCTCCTTGGTATTCTCTACCTGACCAC 537 >seq4984 Length=100180 Score = 300 bits (332), Expect = 4e-79 Identities = 234/279 (84%), Gaps = 9/279 (3%) Strand=Plus/Plus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| ||| | |||||| ||| | || ||||||||| |||| | ||||||||| Sbjct 68041 CGCGGGTACCCCGCATCTGCACGGGGAATTCAATTTCGCTGAAGTGATGTTGGAGACAGT 68100 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 | | ||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 68101 GGAGAAATCGTTACGCCATTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 68160 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180 |||||||||| | ||||||||||||||||||| |||||||| || ||||||| || Sbjct 68161 TTAGGACCGTCAGTGTTACGGCCGCCGTTTACTGGGGCTTCAATTTAGAGCTT-GC---- 68215 Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240 ||||| | ||||||||||| ||||||||||||||||| ||||||||| ||||||| Sbjct 68216 ----ACCCCTCCTATTAACCTTCCAGCACCGGGCAGGCGTCAGACCCTATACTTCCACTT 68271 Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGC 279 |||||||||||||| ||||||||||| ||||||||||| Sbjct 68272 GCGTGTTTGCAGAGTCCTGTGTTTTTAGTAAACAGTCGC 68310 >seq1223 Length=197574 Score = 224 bits (248), Expect = 2e-56 Identities = 172/204 (84%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 76 CCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTG 135 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 4332 CCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAG 4273 Query 136 TTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCATCAAT 195 ||||||||||||||||| |||||||| || | ||||| | || |||| | | | Sbjct 4272 TTACGGCCGCCGTTTACTGGGGCTTCAATTCAATGCTTCTCCGAAGATAACATCTCCTCT 4213 Query 196 TAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGT 255 ||||||||| |||||||||||| |||| |||||||| || ||| || || |||||| Sbjct 4212 TAACCTTCCAGCACCGGGCAGGTGTCAGGCCCTATACTTCATCTTACGATTTGGCAGAGC 4153 Query 256 GCTGTGTTTTTAATAAACAGTCGC 279 |||||||||| |||||||||||| Sbjct 4152 CCTGTGTTTTTGATAAACAGTCGC 4129 >seq21163 Length=23524 Score = 194 bits (214), Expect = 4e-47 Identities = 143/164 (87%), Gaps = 2/164 (1%) Strand=Plus/Minus Query 2 GCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCG-GGTGGAGACAGC 60 |||| || | |||||||||| | | | ||||||||| ||| |||| || ||||||| Sbjct 23382 GCGGGTAATCGGCATCTTCACCGATACTACAATTTCACCGAG-CTCGTGGCTGAGACAGT 23324 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 23323 GCCCAGATCGTTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 23264 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGAT 164 ||||||||||||| |||||||||||||||||| ||||||||||| Sbjct 23263 TTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCGAT 23220 >seq40774 Length=10832 Score = 102 bits (112), Expect = 2e-19 Identities = 196/283 (69%), Gaps = 12/283 (4%) Strand=Plus/Minus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 || || |||||| ||| || | ||||||||||||||| | ||||||||||| ||| Sbjct 9788 TAAACCGCATCTGCACGGCTAGTTCAATTTCACTGAGATGCTTGTGGAGACAGCAGGGCC 9729 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 | |||||| ||||| |||||| | | ||| | |||||||||| ||||| || || Sbjct 9728 A-CGTTACCTCATTCATGCAGGACCACATTTAATGGCCAAGGAATTTTGCTACTTTCAGA 9670 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCG----ATCAAGAGCTTCGCGTTAGC 182 | |||| |||| ||||| || ||| ||| ||| || | | ||| ||| Sbjct 9669 TCCTTATAGTTAAAACCGCCATTCACCACGGCATCGTAAAATGACTAATTTC----TAGA 9614 Query 183 TA-ACCCCATCAATTAACCTTC-CGGCACCGGGCAGGCGTCACACCCTATACGTCCAC-T 239 | | | | | |||| || | |||| ||||||| ||||| | ||||| || | Sbjct 9613 AATATCATTTTATTTAAACTACGTGGCATCGGGCAGAGCTCACAACTTATACAAGTACTT 9554 Query 240 TTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGC 282 || || || ||| |||||||||||| |||||||||||||| Sbjct 9553 TTTGTCTTAGCAAGTTGCTGTGTTTTTGGTAAACAGTCGCAGC 9511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1258527584512