Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq48204 331 2e-88 seq44255 306 8e-81 seq1223 288 2e-75 seq4984 284 3e-74 seq21163 219 9e-55 seq146714 212 1e-52 >seq48204 Length=5524 Score = 331 bits (366), Expect = 2e-88 Identities = 295/373 (79%), Gaps = 25/373 (7%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 ||||||| || | | | ||||||| |||||| |||||||||| || ||||| Sbjct 124 GCATCTTTACTCGTAGTGCAATTTCGCCGAGTTCGCGGTTGAGACAGCTGGGAAGTCGTT 183 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct 184 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTA 243 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCC 186 ||||||| ||||||||||||||||||||| |||| |||||| |||| ||||| ||| Sbjct 244 TAGTTACCACCGCCGTTTACTGGGGCTTAAATTCAGAGCTTCGCTTGCGCTAACCCCTCC 303 Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAG 246 |||||||||||||||||||||||||||||| | |||||||||||||||||||| ||| Sbjct 304 TCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGTCTTGCGACTTGGCAC 363 Query 247 AAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC------------ 294 |||||||||||| ||||||||||||| ||| ||||||||||| Sbjct 364 GGACCTGTGTTTTTAGTAAACAGTCGCTACCCACTAGTCTCTGCGGCCACCACACCCTTT 423 Query 295 -------TGTCAT-AGAC-----AGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGC 341 ||| | | || |||| ||||||||||| ||||||||||| |||||||| Sbjct 424 CGGAGCAAGTCCTAATACGTCGAAGGCCCCCCTTCTCCCGAAGTTACGGGGGCATTTTGC 483 Query 342 CGAGTTCCTTAAC 354 ||||||||||||| Sbjct 484 CGAGTTCCTTAAC 496 >seq44255 Length=9396 Score = 306 bits (338), Expect = 8e-81 Identities = 289/369 (78%), Gaps = 20/369 (5%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | |||| ||||||||| |||||| || ||||||| ||| ||||| Sbjct 5896 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCTGTCGTT 5955 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5956 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 6015 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCC 186 |||||||||||||||||||||||||||| |||| || |||| || ||| Sbjct 6016 TAGTTACGGCCGCCGTTTACTGGGGCTTCGATTCAGAGC-----TTGC----ACCCCTCC 6066 Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAG 246 |||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||| Sbjct 6067 TCTTAACCTTCCAGCACCGGGCAGGCGTCAGACCCTATACGTCGTCTTGCGACTTCGCAG 6126 Query 247 AAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCATA----- 301 | |||||||||||| |||||||||||| ||| ||| ||| || ||| Sbjct 6127 AGCCCTGTGTTTTTGATAAACAGTCGCTACCCCCTGGTCTGTGCCACCACCAATAACTTG 6186 Query 302 ---GAC---AGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACA 355 || ||| | ||||| || |||||||| | || ||||||||||||||| | Sbjct 6187 CGTTACTGGAGGTCACGCTTCTTCCGAAGTTACGCGTGCAATTTGCCGAGTTCCTTCAAC 6246 Query 356 ATAGTTCTC 364 ||||||| Sbjct 6247 GCAGTTCTC 6255 >seq1223 Length=197574 Score = 288 bits (318), Expect = 2e-75 Identities = 235/284 (83%), Gaps = 1/284 (0%) Strand=Plus/Minus Query 70 CCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAG 129 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4332 CCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAG 4273 Query 130 TTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCCCCT 189 ||||||||||||||||||||||||| | |||| |||||| ||||| ||| || Sbjct 4272 TTACGGCCGCCGTTTACTGGGGCTTCAATTCAATGCTTCTCCGAAGATAACATCTCCTCT 4213 Query 190 TAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAA 249 |||||||||||||||||||||| ||||| ||||||| || |||| ||| || ||||| Sbjct 4212 TAACCTTCCAGCACCGGGCAGGTGTCAGGCCCTATACTTCATCTTACGATTTGGCAGAGC 4153 Query 250 CCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC-TGTCATAGACAGGC 308 |||||||||||| ||||||||||| ||| ||| ||| |||||||| | | || ||| Sbjct 4152 CCTGTGTTTTTGATAAACAGTCGCCTGGACCTTTTCACTGCGGCCACGCCTGAGCGTGGC 4093 Query 309 ACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 || ||||||| ||||||| || |||||||| | ||||||| Sbjct 4092 GACCTTTCTCCCGAAGTTACAGGTCTATTTTGCCTAATTCCTTA 4049 >seq4984 Length=100180 Score = 284 bits (314), Expect = 3e-74 Identities = 284/367 (77%), Gaps = 21/367 (6%) Strand=Plus/Plus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 ||||| |||||| ||| |||| | ||||||| | || || | ||||||||| || Sbjct 68047 TACCCCGCATCTGCACGGGGAATTCAATTTCGCTGAAGTGATGTTGGAGACAGTGGAGAA 68106 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 68107 ATCGTTACGCCATTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 68166 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180 |||| | |||||||||||||||||||||||||| | || | || |||| || Sbjct 68167 CCGTCAGTGTTACGGCCGCCGTTTACTGGGGCTTCAATTTAGAGC-----TTGC----AC 68217 Query 181 AGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACT 240 ||| ||||||||||||||||||||||||||||| ||||||| || |||||| | Sbjct 68218 CCCTCCTATTAACCTTCCAGCACCGGGCAGGCGTCAGACCCTATACTTCCACTTGCGTGT 68277 Query 241 TAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCT-GTCA 299 | ||||| ||||||||||| ||||||||||||| |||||| | ||| ||| ||| Sbjct 68278 TTGCAGAGTCCTGTGTTTTTAGTAAACAGTCGCTACTCCCTATTTTGTGCCACCTACTCA 68337 Query 300 TAG----------ACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCC 349 ||| |||| ||||||| || ||||||| || | ||||||||||||| Sbjct 68338 TAGTTGCCTAAAAGCAGGTTACCCTTCTTCCGAAGTTACAGGTATAATTTGCCGAGTTCC 68397 Query 350 TT-AACA 355 || |||| Sbjct 68398 TTCAACA 68404 >seq21163 Length=23524 Score = 219 bits (242), Expect = 9e-55 Identities = 147/164 (90%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 5 CGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCG 64 |||||||||||||| | ||||||||||||||| | | |||||||||||||| |||| Sbjct 23373 CGGCATCTTCACCGATACTACAATTTCACCGAGCTCGTGGCTGAGACAGTGCCCAGATCG 23314 Query 65 TTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 124 |||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 23313 TTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 23254 Query 125 TATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTC 168 |||||||||||||||||||||||||||||| |||| |||||| Sbjct 23253 TATAGTTACGGCCGCCGTTTACTGGGGCTTCGATTCAATGCTTC 23210 >seq146714 Length=1191 Score = 212 bits (234), Expect = 1e-52 Identities = 176/213 (83%), Gaps = 9/213 (4%) Strand=Plus/Plus Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 4 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 63 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180 |||||||||||||||||||||||||||||| ||| ||| | || |||| | | Sbjct 64 CCGTTATAGTTACGGCCGCCGTTTACTGGGACTTCAGTCAAGAGC-----TTGC---ACC 115 Query 181 AGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACT 240 || | |||| ||||||||||||||||||||||| ||||||| || ||| || | Sbjct 116 CCAT-CATTTAATCTTCCAGCACCGGGCAGGCGTCACTCCCTATACGTCCACTTTCGTGT 174 Query 241 TAGCAGAAACCTGTGTTTTTGGTAAACAGTCGC 273 | ||||| | |||||||||| ||||||||||| Sbjct 175 TTGCAGAGAGCTGTGTTTTTATTAAACAGTCGC 207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1060485172736