Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq4984 154 3e-35 >seq4984 Length=100180 Score = 154 bits (170), Expect = 3e-35 Identities = 173/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 112 GGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCG 171 ||||| ||| | ||| |||||||||||||||||||||||| ||| ||||||||||||| Sbjct 67866 GGACATTGTATGGTGGGTAGTTTGACTGGGGCGGTCGCCTCCTAAAAAGTAACGGAGGCG 67807 Query 172 CCCAAAGATACCCTC-AGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTG 230 | ||| || || |||| || ||||| || | ||| || |||| ||| || Sbjct 67806 TGCGAAGGTAAGCTAGAGCT-GGTCGGAAATCAGCTTGATAGTATAATGGCATAAGCTTG 67748 Query 231 TTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGT 290 ||||||||| | |||| | ||||| |||||||||||| | || |||||||| | | Sbjct 67747 CCTGACTGCGAGGCTGACAAGCCAAGCAGAGACGAAAGTCGGTCATAGTGATCCGGTGAT 67688 Query 291 GCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||| |||||| || | |||||| ||||||||||| ||| | ||||||| Sbjct 67687 TCTGTATGGAAGGGTCATCGCTCAACGGATAAAAGGTACGCCGGGGATA 67639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 980629361536