Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= AAMG01001182.1 Length=261 Score E Sequences producing significant alignments: (Bits) Value seq103 125 1e-26 seq44239 107 3e-21 seq81043 87.8 3e-15 seq1855 87.8 3e-15 seq84471 78.8 1e-12 >seq103 Length=407632 Score = 125 bits (138), Expect = 1e-26 Identities = 155/211 (73%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 29 GACTTCTTCGCGCGCTTTTTTCGTCCAGGCCCGGTGCCGGCGCTTCTTCCAGTACCTTCT 88 ||| ||||||||| || | || | |||||||||||| ||||| || | ||||||| Sbjct 57681 GACCTCTTCGCGCAGCTTCTGCGGA-ATGCCCGGTGCCGGGGCTTCCTCGACCACCTTCT 57623 Query 89 GGTGACGACGTTGCAGCGAGCAATCGCGGTCGCCCAGGTGGATGGCGTGGCCCTGGCCGT 148 |||| || || ||||||||||| ||||||||| |||||||||||| | ||| | ||||| Sbjct 57622 GGTGGCGGCGCTGCAGCGAGCAGTCGCGGTCGAACAGGTGGATGGCCTTGCCTTCGCCGT 57563 Query 149 CGGACAGTACTTGCACTTCCACGTGACGTGGGTTGGTCAGGTACTTTTCCAGGTAGACCA 208 || | || || | || |||||||| |||| |||| |||| |||| ||| || Sbjct 57562 CGCCGATGACCTGGATCTCGACGTGACGCGGGTGCTGCAGGAACTTCTCCATGTACACGG 57503 Query 209 TCGGGTTGCCGAACCAGGCGCCCGCTTCGGA 239 | || |||||| ||||| || ||||| Sbjct 57502 TGTCGTCGCCGAAGGCCGCGCCGGCCTCGGA 57472 Score = 80.6 bits (88), Expect = 4e-13 Identities = 77/99 (78%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 52 TCCAGGCCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAA 111 |||| | |||| | ||||||||| || | |||||||||| || || |||| |||||| Sbjct 394491 TCCACGGCCGGCGACGGCGCTTCCTCGATCACCTTCTGGTTGCGGCGCTGCACCGAGCAG 394550 Query 112 TCGCGGTCGCCCAGGTGGATGGCGTGGCCCTGGCCGTCG 150 ||||| ||||||||||| | ||| ||| |||| |||| Sbjct 394551 TCGCGCTCGCCCAGGTGCACCACGTTGCCATGGCGGTCG 394589 >seq44239 Length=9401 Score = 107 bits (118), Expect = 3e-21 Identities = 115/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 58 CCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCGG 117 || || || ||||||||||| | || || |||||||||||||||| || ||||| || Sbjct 7112 CCTGGCGCTGGCGCTTCTTCAACAACTTTTTGGTGACGACGTTGCATTGAACAATCACGC 7053 Query 118 TCGCCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACGT 177 || || | ||| | || | ||| || ||||| | |||||||| ||||| | ||||||| Sbjct 7052 TCACCTAAGTGAACTGCATTGCCTTGACCGTCTGCAAGTACTTGAACTTCGATGTGACGT 6993 Query 178 GGGTTGGTCAGGTACTTTTCCAGGTAGACCAT 209 ||||| ||| | ||||||| ||| ||||| Sbjct 6992 GGGTTTTCAAGGAATTTTTCCATGTAAACCAT 6961 >seq81043 Length=4245 Score = 87.8 bits (96), Expect = 3e-15 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 61 GGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCGGTCG 120 |||||||| | ||||||||| |||||||||| ||| || |||| |||||| ||||| || Sbjct 4094 GGTGCCGGGGTTTCTTCCAGCACCTTCTGGTTACGGCGCTGCACCGAGCAGTCGCGCACG 4035 Query 121 CCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACG 176 || ||| || | | |||||||||||| | || |||||||||| ||| || Sbjct 4034 CCGAGGGCGAGCACTTCACCCTGGCCGTCGCCGAACACCTGCACTTCCAGGTGGCG 3979 >seq1855 Length=167244 Score = 87.8 bits (96), Expect = 3e-15 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 57 GCCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCG 116 |||||||||||| |||||||||| || || || || || || |||| || || || || Sbjct 159790 GCCCGGTGCCGGTGCTTCTTCCACCACTTTTTGATGGCGGCGCTGCATTGAACAGTCACG 159849 Query 117 GTCGCCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACG 176 || || | ||| || || | |||||| || || | ||| || || | ||| | ||||| Sbjct 159850 TTCACCTAAGTGAATCGCATTGCCCTGACCATCCGCCAGCACCTGAATTTCGATATGACG 159909 Query 177 TGGGTTGGTCAGGTACTTTTCCAGGTAGACCAT 209 |||||| |||| | || |||| || ||||| Sbjct 159910 TGGGTTTTCCAGGAATTTCTCCATATACACCAT 159942 >seq84471 Length=3696 Score = 78.8 bits (86), Expect = 1e-12 Identities = 91/123 (74%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 54 CAGGCCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATC 113 |||| ||| ||||| | |||||||| |||||||| | || || |||| |||||| || Sbjct 3138 CAGGTTCGGCGCCGGAGTCTCTTCCAGCACCTTCTGATTGCGGCGCTGCACCGAGCAGTC 3197 Query 114 GCGGTCGCCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTG 173 ||| |||| ||| ||| | | |||||||||||| | || ||||| |||| ||| Sbjct 3198 GCGCACGCCGAGGGCGATCACCTCGCCCTGGCCGTCACCGAACACCTGCACCTCCAGGTG 3257 Query 174 ACG 176 ||| Sbjct 3258 ACG 3260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 734714917320