Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20]
180,236 sequences; 2,439,301,466 total letters
Query= AAMG01001182.1
Length=261
Score E
Sequences producing significant alignments: (Bits) Value
seq103 125 1e-26
seq44239 107 3e-21
seq81043 87.8 3e-15
seq1855 87.8 3e-15
seq84471 78.8 1e-12
>seq103
Length=407632
Score = 125 bits (138), Expect = 1e-26
Identities = 155/211 (73%), Gaps = 1/211 (0%)
Strand=Plus/Minus
Query 29 GACTTCTTCGCGCGCTTTTTTCGTCCAGGCCCGGTGCCGGCGCTTCTTCCAGTACCTTCT 88
||| ||||||||| || | || | |||||||||||| ||||| || | |||||||
Sbjct 57681 GACCTCTTCGCGCAGCTTCTGCGGA-ATGCCCGGTGCCGGGGCTTCCTCGACCACCTTCT 57623
Query 89 GGTGACGACGTTGCAGCGAGCAATCGCGGTCGCCCAGGTGGATGGCGTGGCCCTGGCCGT 148
|||| || || ||||||||||| ||||||||| |||||||||||| | ||| | |||||
Sbjct 57622 GGTGGCGGCGCTGCAGCGAGCAGTCGCGGTCGAACAGGTGGATGGCCTTGCCTTCGCCGT 57563
Query 149 CGGACAGTACTTGCACTTCCACGTGACGTGGGTTGGTCAGGTACTTTTCCAGGTAGACCA 208
|| | || || | || |||||||| |||| |||| |||| |||| ||| ||
Sbjct 57562 CGCCGATGACCTGGATCTCGACGTGACGCGGGTGCTGCAGGAACTTCTCCATGTACACGG 57503
Query 209 TCGGGTTGCCGAACCAGGCGCCCGCTTCGGA 239
| || |||||| ||||| || |||||
Sbjct 57502 TGTCGTCGCCGAAGGCCGCGCCGGCCTCGGA 57472
Score = 80.6 bits (88), Expect = 4e-13
Identities = 77/99 (78%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 52 TCCAGGCCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAA 111
|||| | |||| | ||||||||| || | |||||||||| || || |||| ||||||
Sbjct 394491 TCCACGGCCGGCGACGGCGCTTCCTCGATCACCTTCTGGTTGCGGCGCTGCACCGAGCAG 394550
Query 112 TCGCGGTCGCCCAGGTGGATGGCGTGGCCCTGGCCGTCG 150
||||| ||||||||||| | ||| ||| |||| ||||
Sbjct 394551 TCGCGCTCGCCCAGGTGCACCACGTTGCCATGGCGGTCG 394589
>seq44239
Length=9401
Score = 107 bits (118), Expect = 3e-21
Identities = 115/152 (76%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 58 CCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCGG 117
|| || || ||||||||||| | || || |||||||||||||||| || ||||| ||
Sbjct 7112 CCTGGCGCTGGCGCTTCTTCAACAACTTTTTGGTGACGACGTTGCATTGAACAATCACGC 7053
Query 118 TCGCCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACGT 177
|| || | ||| | || | ||| || ||||| | |||||||| ||||| | |||||||
Sbjct 7052 TCACCTAAGTGAACTGCATTGCCTTGACCGTCTGCAAGTACTTGAACTTCGATGTGACGT 6993
Query 178 GGGTTGGTCAGGTACTTTTCCAGGTAGACCAT 209
||||| ||| | ||||||| ||| |||||
Sbjct 6992 GGGTTTTCAAGGAATTTTTCCATGTAAACCAT 6961
>seq81043
Length=4245
Score = 87.8 bits (96), Expect = 3e-15
Identities = 89/116 (77%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 61 GGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCGGTCG 120
|||||||| | ||||||||| |||||||||| ||| || |||| |||||| ||||| ||
Sbjct 4094 GGTGCCGGGGTTTCTTCCAGCACCTTCTGGTTACGGCGCTGCACCGAGCAGTCGCGCACG 4035
Query 121 CCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACG 176
|| ||| || | | |||||||||||| | || |||||||||| ||| ||
Sbjct 4034 CCGAGGGCGAGCACTTCACCCTGGCCGTCGCCGAACACCTGCACTTCCAGGTGGCG 3979
>seq1855
Length=167244
Score = 87.8 bits (96), Expect = 3e-15
Identities = 111/153 (73%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 57 GCCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCG 116
|||||||||||| |||||||||| || || || || || || |||| || || || ||
Sbjct 159790 GCCCGGTGCCGGTGCTTCTTCCACCACTTTTTGATGGCGGCGCTGCATTGAACAGTCACG 159849
Query 117 GTCGCCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACG 176
|| || | ||| || || | |||||| || || | ||| || || | ||| | |||||
Sbjct 159850 TTCACCTAAGTGAATCGCATTGCCCTGACCATCCGCCAGCACCTGAATTTCGATATGACG 159909
Query 177 TGGGTTGGTCAGGTACTTTTCCAGGTAGACCAT 209
|||||| |||| | || |||| || |||||
Sbjct 159910 TGGGTTTTCCAGGAATTTCTCCATATACACCAT 159942
>seq84471
Length=3696
Score = 78.8 bits (86), Expect = 1e-12
Identities = 91/123 (74%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 54 CAGGCCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATC 113
|||| ||| ||||| | |||||||| |||||||| | || || |||| |||||| ||
Sbjct 3138 CAGGTTCGGCGCCGGAGTCTCTTCCAGCACCTTCTGATTGCGGCGCTGCACCGAGCAGTC 3197
Query 114 GCGGTCGCCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTG 173
||| |||| ||| ||| | | |||||||||||| | || ||||| |||| |||
Sbjct 3198 GCGCACGCCGAGGGCGATCACCTCGCCCTGGCCGTCACCGAACACCTGCACCTCCAGGTG 3257
Query 174 ACG 176
|||
Sbjct 3258 ACG 3260
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 734714917320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |