Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= AAMG01001188.1 Length=621 Score E Sequences producing significant alignments: (Bits) Value seq146912 670 0.0 seq5 338 2e-90 seq82750 134 5e-29 >seq146912 Length=1190 Score = 670 bits (742), Expect = 0.0 Identities = 515/603 (85%), Gaps = 7/603 (1%) Strand=Plus/Plus Query 1 TCGATCGCCTTTGGCACGGGAAGTGGCCTTGCTTTGGCTTTTCGAGGCGTTCGCCGAGAA 60 |||||| ||| ||| ||| || |||| |||| | ||| |||||||| |||||||| Sbjct 586 TCGATCTGCTT-GGCGCGGCTGGTCGCCT-GCTTGGCCTTG--GAGGCGTTGGCCGAGAA 641 Query 61 ACGGCTTGACGAAGGATTTGCAGCTCGGTGATCTGCGCCTTCTTTCTTGGCGTTGTCCGA 120 ||||| ||| |||| | |||||||||| |||||| || || |||||| ||||||||||| Sbjct 642 GCGGCT-GACAAAGG-TCTGCAGCTCGGCGATCTGGGCTTT-TTTCTTTGCGTTGTCCGA 698 Query 121 CAGCAGTTGCTCGCGGGACTGGGTCGCCACGGTCATGTACTCGTCGTAGTTGCCCGGGAA 180 |||||| ||||||| | |||||| || ||||||||||||||||||||||||| ||||| Sbjct 699 CAGCAGCCGCTCGCGCGCCTGGGTGGCGGCGGTCATGTACTCGTCGTAGTTGCCGGGGAA 758 Query 181 CAGGCGCAGCTCGCCGTAGTCCAGGTCAGCCATGTGGGTACACACGCTGTTCAGGAAGTG 240 ||| |||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| Sbjct 759 CAGACGCAGCTCGCCGTAATCCAGGTCAGCCATGTGGGTGCACACGCTGTTTAGGAAGTG 818 Query 241 ACGGTCGTGAGAGATGATGATCATCAGGCTGGAACGCTGGGTCAGGATATTTTCCAGCCA 300 |||||||| || ||||||||||| ||||| ||| || ||||| |||||||||| Sbjct 819 GCGGTCGTGGGAAATGATGATCATGGTGCTGGTGCGCGCCGTGAGGATGCTTTCCAGCCA 878 Query 301 GCGGATGGTGTTGATGTCCAAGTGGTTGGTCGGTTCGTCGAGCAACAGCACTTCAGGATC 360 ||||||||||||||| |||| ||||||||| || |||||||||| |||||| || || || Sbjct 879 GCGGATGGTGTTGATATCCAGGTGGTTGGTTGGCTCGTCGAGCAGCAGCACGTCCGGGTC 938 Query 361 GGAAAACAGCGCCTGGGCCAGCAATACACGCAGCTTCCAGCCCGGGGACACTTCGCTCAT 420 ||| ||||||||||| ||||||||||| |||||||||||||| |||| ||||||||||| Sbjct 939 GGAGAACAGCGCCTGAGCCAGCAATACGCGCAGCTTCCAGCCGGGGGCGACTTCGCTCAT 998 Query 421 CGGACCGAAGTGCTGCTCCAGCGGAATACCCAGACCCAGCAGCAGCTCACCGGCACGGGA 480 ||||||||||||||| |||||||||||||||| ||| ||||||||||| ||||| || || Sbjct 999 CGGACCGAAGTGCTGTTCCAGCGGAATACCCAAACCGAGCAGCAGCTCGCCGGCGCGAGA 1058 Query 481 TTCGGCGGTGTAGCCGTCCATCTCGGCGAACTCGGTTTCCAGCTCGGCCACGGCCATGCC 540 ||||||||||||||||||||| || |||||||| |||||| ||| | || ||| || Sbjct 1059 TTCGGCGGTGTAGCCGTCCATTTCCGCGAACTCACCTTCCAGTTCGCCGACTTTCATCCC 1118 Query 541 GTCTTCTTCGCTCATTTCCGGCAGCGAGTAAATACCATCACGCTCGGCCTTGACCTTCCA 600 ||||||||||||||| || ||||||||||| |||| ||||||||||||||||||||||| Sbjct 1119 GTCTTCTTCGCTCATCTCTGGCAGCGAGTAGATACGGTCACGCTCGGCCTTGACCTTCCA 1178 Query 601 CAG 603 ||| Sbjct 1179 CAG 1181 >seq5 Length=869209 Score = 338 bits (374), Expect = 2e-90 Identities = 437/596 (73%), Gaps = 12/596 (2%) Strand=Plus/Minus Query 11 TTGGCACGGGAAGTGGCCTTGCTTTGGCTTTTCGAGGCGTTCGCCGAGAAACGGCTTGAC 70 ||||||||| ||||||| | ||| || || ||||| |||||||||||||| || Sbjct 679044 TTGGCACGGCTGGTGGCCTGACG--GGCCTTA-GAAGCGTTGGCCGAGAAACGGCTA-AC 678989 Query 71 GAAGGATTTGCAGCTCGGTGATCTGCGCCTTCTTTCTTGGCGTTGTCCGACAGCAGTTGC 130 ||| | | |||| ||||| || || || ||||| ||| ||||| || | || | || Sbjct 678988 GAAAG-TCTGCAACTCGGCAATTTGTGCTTTCTT-CTTAGCGTTATCGGCTAGTAAACGC 678931 Query 131 TCGCGGGACTGGGTCGCCACGGTCATGTACTCGTCGTAGTTGCCCGGGAACAGGCGCAGC 190 || || | ||| |||||| | ||||| ||||| |||||||| ||||| | | ||||| Sbjct 678930 TCCCGCGCCTGCGTCGCCGCTGTCATATACTCATCGTAGTTACCCGGATAAACCCGCAGT 678871 Query 191 TCGCCGTAGTCCAGGTCAGCCATGTGGGTACACACGCTGTTCAGGAAGTGACGGTCGTGA 250 || || ||||||| |||||||| |||||||| || ||||| | ||||| |||||||| Sbjct 678870 TCACCAAAGTCCAGATCAGCCATATGGGTACAGACACTGTTTAAAAAGTGCCGGTCGTGC 678811 Query 251 GAGATGATGATCATCAGGCTGGA---ACGCTGGGTCAGGATATTTTCCAGCCAGCGGATG 307 || || || | ||| | | || ||||| || || | |||||||||||||| || Sbjct 678810 GAAATAATCACCAT---GGTCGAGTTACGCTCGGCCAATACGTTTTCCAGCCAGCGAATA 678754 Query 308 GTGTTGATGTCCAAGTGGTTGGTCGGTTCGTCGAGCAACAGCACTTCAGGATCGGAAAAC 367 || |||||||||| || ||||||||||||||| ||||||| | || ||||| | |||| Sbjct 678753 GTATTGATGTCCAGGTTGTTGGTCGGTTCGTCCAGCAACATAATATCCGGATCAGCAAAC 678694 Query 368 AGCGCCTGGGCCAGCAATACACGCAGCTTCCAGCCCGGGGACACTTCGCTCATCGGACCG 427 ||| |||| ||||||||||| ||||| || | ||||| | ||| | ||| || Sbjct 678693 AGCACCTGCGCCAGCAATACCCGCAGTTTAAAACCCGGCGCCACCGCAGACATTAAGCCA 678634 Query 428 AAGTGCTGCTCCAGCGGAATACCCAGACCCAGCAGCAGCTCACCGGCACGGGATTCGGCG 487 |||| || || | |||||||| | |||| ||||| |||||||| || ||||||||| Sbjct 678633 TAGTGTTGTTCAATTGGAATACCTACGCCCAAAAGCAGTTCACCGGCGCGAGATTCGGCG 678574 Query 488 GTGTAGCCGTCCATCTCGGCGAACTCGGTTTCCAGCTCGGCCACGGCCATGCCGTCTTCT 547 | ||||| |||||||| | || | ||||| ||||| ||| ||| ||||||||| Sbjct 678573 GAATAGCCATCCATCTCACCAAAAGCCACCTCCAGATCGGCGACGCGCATACCGTCTTCT 678514 Query 548 TCGCTCATTTCCGGCAGCGAGTAAATACCATCACGCTCGGCCTTGACCTTCCACAG 603 || ||| ||||| || || || | ||| |||||||| || ||| |||||| Sbjct 678513 TCTGACATCTCCGGATCCGCATAGATCCGATCCCGCTCGGCTTTTACCGCCCACAG 678458 >seq82750 Length=3983 Score = 134 bits (148), Expect = 5e-29 Identities = 296/441 (67%), Gaps = 2/441 (0%) Strand=Plus/Minus Query 164 TCGTAGTTGCCCGGGAACAGGCGCAGCTCGCCGTAGTCCAGGTCAGCCATGTGGGTACAC 223 |||||||| || ||| | | || ||||| ||||| || | || ||||| || ||||| Sbjct 3026 TCGTAGTTACCAGGGTAAATTCGTAGCTCACCGTAATCGATATCGGCCATATGTGTACAT 2967 Query 224 ACGCTGTTCAGGAAGTGACGGTCGTGAGAGATGATGATCATCAGGCTGGAACGCTGGGTC 283 || ||| | ||||||||||||||| ||||| || |||||| | ||||||| | Sbjct 2966 ACCGAGTTTAAGAAGTGACGGTCGTGCGAGATAATAATCATCGTACACTTACGCTGGTTA 2907 Query 284 AGGATATTTTCCAGCCAGCGGATGGTGTTGATGTCCAAGTGGTTGGTCGGTTCGTCGAGC 343 || || | ||||| ||||| | || || | || ||||| || || || || Sbjct 2906 AGCTCGTTAGCTAGCCAAGTAATGGTATGAATATCAAGGTTATTGGTTGGCTCATCAAGT 2847 Query 344 AACAGCACTTCAGGATCGGAAAACAGCGCCTGGGCCAGCAATACACGCAGCTTCCAGCCC 403 | || | || || | | ||||||||| || || | || ||||| || ||||| || Sbjct 2846 AGCAAAATATCTGGGTTTGCAAACAGCGCTTGTGCTAACAGCACACGTAGTTTCCAACCT 2787 Query 404 GGGGACAC-TTCGCTCATCGGACCGAAGTGCTGCTCCAGCGGAATACCCAGACCCAGCAG 462 || | || || || ||| ||| | || ||| || ||||||| | || Sbjct 2786 GGCGCGACGTTTGC-CATTAAGCCGTAATGAAACTCTTGCTCAATACCCGCTTGGATCAA 2728 Query 463 CAGCTCACCGGCACGGGATTCGGCGGTGTAGCCGTCCATCTCGGCGAACTCGGTTTCCAG 522 | || | ||||| ||| || |||||||| ||||| ||||| || | |||| || Sbjct 2727 AATTTCTTCTGCACGACTTTCTGCTGTGTAGCCATCCATTTCGGCAAAAATGCTTTCAAG 2668 Query 523 CTCGGCCACGGCCATGCCGTCTTCTTCGCTCATTTCCGGCAGCGAGTAAATACCATCACG 582 || || || ||| ||||||||||| |||||||| || || ||||| |||| || || Sbjct 2667 TTCAGCGACTTTCATACCGTCTTCTTCACTCATTTCTGGTAGTGAGTAGATACGGTCGCG 2608 Query 583 CTCGGCCTTGACCTTCCACAG 603 ||| || || ||||| || Sbjct 2607 CTCTTGTTTAACTTTCCAAAG 2587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1878102700656