Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20]
180,236 sequences; 2,439,301,466 total letters
Query= AAMG01001188.1
Length=621
Score E
Sequences producing significant alignments: (Bits) Value
seq146912 670 0.0
seq5 338 2e-90
seq82750 134 5e-29
>seq146912
Length=1190
Score = 670 bits (742), Expect = 0.0
Identities = 515/603 (85%), Gaps = 7/603 (1%)
Strand=Plus/Plus
Query 1 TCGATCGCCTTTGGCACGGGAAGTGGCCTTGCTTTGGCTTTTCGAGGCGTTCGCCGAGAA 60
|||||| ||| ||| ||| || |||| |||| | ||| |||||||| ||||||||
Sbjct 586 TCGATCTGCTT-GGCGCGGCTGGTCGCCT-GCTTGGCCTTG--GAGGCGTTGGCCGAGAA 641
Query 61 ACGGCTTGACGAAGGATTTGCAGCTCGGTGATCTGCGCCTTCTTTCTTGGCGTTGTCCGA 120
||||| ||| |||| | |||||||||| |||||| || || |||||| |||||||||||
Sbjct 642 GCGGCT-GACAAAGG-TCTGCAGCTCGGCGATCTGGGCTTT-TTTCTTTGCGTTGTCCGA 698
Query 121 CAGCAGTTGCTCGCGGGACTGGGTCGCCACGGTCATGTACTCGTCGTAGTTGCCCGGGAA 180
|||||| ||||||| | |||||| || ||||||||||||||||||||||||| |||||
Sbjct 699 CAGCAGCCGCTCGCGCGCCTGGGTGGCGGCGGTCATGTACTCGTCGTAGTTGCCGGGGAA 758
Query 181 CAGGCGCAGCTCGCCGTAGTCCAGGTCAGCCATGTGGGTACACACGCTGTTCAGGAAGTG 240
||| |||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||
Sbjct 759 CAGACGCAGCTCGCCGTAATCCAGGTCAGCCATGTGGGTGCACACGCTGTTTAGGAAGTG 818
Query 241 ACGGTCGTGAGAGATGATGATCATCAGGCTGGAACGCTGGGTCAGGATATTTTCCAGCCA 300
|||||||| || ||||||||||| ||||| ||| || ||||| ||||||||||
Sbjct 819 GCGGTCGTGGGAAATGATGATCATGGTGCTGGTGCGCGCCGTGAGGATGCTTTCCAGCCA 878
Query 301 GCGGATGGTGTTGATGTCCAAGTGGTTGGTCGGTTCGTCGAGCAACAGCACTTCAGGATC 360
||||||||||||||| |||| ||||||||| || |||||||||| |||||| || || ||
Sbjct 879 GCGGATGGTGTTGATATCCAGGTGGTTGGTTGGCTCGTCGAGCAGCAGCACGTCCGGGTC 938
Query 361 GGAAAACAGCGCCTGGGCCAGCAATACACGCAGCTTCCAGCCCGGGGACACTTCGCTCAT 420
||| ||||||||||| ||||||||||| |||||||||||||| |||| |||||||||||
Sbjct 939 GGAGAACAGCGCCTGAGCCAGCAATACGCGCAGCTTCCAGCCGGGGGCGACTTCGCTCAT 998
Query 421 CGGACCGAAGTGCTGCTCCAGCGGAATACCCAGACCCAGCAGCAGCTCACCGGCACGGGA 480
||||||||||||||| |||||||||||||||| ||| ||||||||||| ||||| || ||
Sbjct 999 CGGACCGAAGTGCTGTTCCAGCGGAATACCCAAACCGAGCAGCAGCTCGCCGGCGCGAGA 1058
Query 481 TTCGGCGGTGTAGCCGTCCATCTCGGCGAACTCGGTTTCCAGCTCGGCCACGGCCATGCC 540
||||||||||||||||||||| || |||||||| |||||| ||| | || ||| ||
Sbjct 1059 TTCGGCGGTGTAGCCGTCCATTTCCGCGAACTCACCTTCCAGTTCGCCGACTTTCATCCC 1118
Query 541 GTCTTCTTCGCTCATTTCCGGCAGCGAGTAAATACCATCACGCTCGGCCTTGACCTTCCA 600
||||||||||||||| || ||||||||||| |||| |||||||||||||||||||||||
Sbjct 1119 GTCTTCTTCGCTCATCTCTGGCAGCGAGTAGATACGGTCACGCTCGGCCTTGACCTTCCA 1178
Query 601 CAG 603
|||
Sbjct 1179 CAG 1181
>seq5
Length=869209
Score = 338 bits (374), Expect = 2e-90
Identities = 437/596 (73%), Gaps = 12/596 (2%)
Strand=Plus/Minus
Query 11 TTGGCACGGGAAGTGGCCTTGCTTTGGCTTTTCGAGGCGTTCGCCGAGAAACGGCTTGAC 70
||||||||| ||||||| | ||| || || ||||| |||||||||||||| ||
Sbjct 679044 TTGGCACGGCTGGTGGCCTGACG--GGCCTTA-GAAGCGTTGGCCGAGAAACGGCTA-AC 678989
Query 71 GAAGGATTTGCAGCTCGGTGATCTGCGCCTTCTTTCTTGGCGTTGTCCGACAGCAGTTGC 130
||| | | |||| ||||| || || || ||||| ||| ||||| || | || | ||
Sbjct 678988 GAAAG-TCTGCAACTCGGCAATTTGTGCTTTCTT-CTTAGCGTTATCGGCTAGTAAACGC 678931
Query 131 TCGCGGGACTGGGTCGCCACGGTCATGTACTCGTCGTAGTTGCCCGGGAACAGGCGCAGC 190
|| || | ||| |||||| | ||||| ||||| |||||||| ||||| | | |||||
Sbjct 678930 TCCCGCGCCTGCGTCGCCGCTGTCATATACTCATCGTAGTTACCCGGATAAACCCGCAGT 678871
Query 191 TCGCCGTAGTCCAGGTCAGCCATGTGGGTACACACGCTGTTCAGGAAGTGACGGTCGTGA 250
|| || ||||||| |||||||| |||||||| || ||||| | ||||| ||||||||
Sbjct 678870 TCACCAAAGTCCAGATCAGCCATATGGGTACAGACACTGTTTAAAAAGTGCCGGTCGTGC 678811
Query 251 GAGATGATGATCATCAGGCTGGA---ACGCTGGGTCAGGATATTTTCCAGCCAGCGGATG 307
|| || || | ||| | | || ||||| || || | |||||||||||||| ||
Sbjct 678810 GAAATAATCACCAT---GGTCGAGTTACGCTCGGCCAATACGTTTTCCAGCCAGCGAATA 678754
Query 308 GTGTTGATGTCCAAGTGGTTGGTCGGTTCGTCGAGCAACAGCACTTCAGGATCGGAAAAC 367
|| |||||||||| || ||||||||||||||| ||||||| | || ||||| | ||||
Sbjct 678753 GTATTGATGTCCAGGTTGTTGGTCGGTTCGTCCAGCAACATAATATCCGGATCAGCAAAC 678694
Query 368 AGCGCCTGGGCCAGCAATACACGCAGCTTCCAGCCCGGGGACACTTCGCTCATCGGACCG 427
||| |||| ||||||||||| ||||| || | ||||| | ||| | ||| ||
Sbjct 678693 AGCACCTGCGCCAGCAATACCCGCAGTTTAAAACCCGGCGCCACCGCAGACATTAAGCCA 678634
Query 428 AAGTGCTGCTCCAGCGGAATACCCAGACCCAGCAGCAGCTCACCGGCACGGGATTCGGCG 487
|||| || || | |||||||| | |||| ||||| |||||||| || |||||||||
Sbjct 678633 TAGTGTTGTTCAATTGGAATACCTACGCCCAAAAGCAGTTCACCGGCGCGAGATTCGGCG 678574
Query 488 GTGTAGCCGTCCATCTCGGCGAACTCGGTTTCCAGCTCGGCCACGGCCATGCCGTCTTCT 547
| ||||| |||||||| | || | ||||| ||||| ||| ||| |||||||||
Sbjct 678573 GAATAGCCATCCATCTCACCAAAAGCCACCTCCAGATCGGCGACGCGCATACCGTCTTCT 678514
Query 548 TCGCTCATTTCCGGCAGCGAGTAAATACCATCACGCTCGGCCTTGACCTTCCACAG 603
|| ||| ||||| || || || | ||| |||||||| || ||| ||||||
Sbjct 678513 TCTGACATCTCCGGATCCGCATAGATCCGATCCCGCTCGGCTTTTACCGCCCACAG 678458
>seq82750
Length=3983
Score = 134 bits (148), Expect = 5e-29
Identities = 296/441 (67%), Gaps = 2/441 (0%)
Strand=Plus/Minus
Query 164 TCGTAGTTGCCCGGGAACAGGCGCAGCTCGCCGTAGTCCAGGTCAGCCATGTGGGTACAC 223
|||||||| || ||| | | || ||||| ||||| || | || ||||| || |||||
Sbjct 3026 TCGTAGTTACCAGGGTAAATTCGTAGCTCACCGTAATCGATATCGGCCATATGTGTACAT 2967
Query 224 ACGCTGTTCAGGAAGTGACGGTCGTGAGAGATGATGATCATCAGGCTGGAACGCTGGGTC 283
|| ||| | ||||||||||||||| ||||| || |||||| | ||||||| |
Sbjct 2966 ACCGAGTTTAAGAAGTGACGGTCGTGCGAGATAATAATCATCGTACACTTACGCTGGTTA 2907
Query 284 AGGATATTTTCCAGCCAGCGGATGGTGTTGATGTCCAAGTGGTTGGTCGGTTCGTCGAGC 343
|| || | ||||| ||||| | || || | || ||||| || || || ||
Sbjct 2906 AGCTCGTTAGCTAGCCAAGTAATGGTATGAATATCAAGGTTATTGGTTGGCTCATCAAGT 2847
Query 344 AACAGCACTTCAGGATCGGAAAACAGCGCCTGGGCCAGCAATACACGCAGCTTCCAGCCC 403
| || | || || | | ||||||||| || || | || ||||| || ||||| ||
Sbjct 2846 AGCAAAATATCTGGGTTTGCAAACAGCGCTTGTGCTAACAGCACACGTAGTTTCCAACCT 2787
Query 404 GGGGACAC-TTCGCTCATCGGACCGAAGTGCTGCTCCAGCGGAATACCCAGACCCAGCAG 462
|| | || || || ||| ||| | || ||| || ||||||| | ||
Sbjct 2786 GGCGCGACGTTTGC-CATTAAGCCGTAATGAAACTCTTGCTCAATACCCGCTTGGATCAA 2728
Query 463 CAGCTCACCGGCACGGGATTCGGCGGTGTAGCCGTCCATCTCGGCGAACTCGGTTTCCAG 522
| || | ||||| ||| || |||||||| ||||| ||||| || | |||| ||
Sbjct 2727 AATTTCTTCTGCACGACTTTCTGCTGTGTAGCCATCCATTTCGGCAAAAATGCTTTCAAG 2668
Query 523 CTCGGCCACGGCCATGCCGTCTTCTTCGCTCATTTCCGGCAGCGAGTAAATACCATCACG 582
|| || || ||| ||||||||||| |||||||| || || ||||| |||| || ||
Sbjct 2667 TTCAGCGACTTTCATACCGTCTTCTTCACTCATTTCTGGTAGTGAGTAGATACGGTCGCG 2608
Query 583 CTCGGCCTTGACCTTCCACAG 603
||| || || ||||| ||
Sbjct 2607 CTCTTGTTTAACTTTCCAAAG 2587
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1878102700656
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |